RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 PPP1R2P1Q96PQ5 205 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 SLITRK1Q96PX8 696 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 COQ7Q99807 217 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 THTPAQ9BU02 230 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 DIABLOQ9NR28 239 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 IP6K2Q9UHH9 426 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 C15orf41Q9Y2V0 281 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 B2RBV5 119 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 ATP6V1G2O95670 118 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 GNA15P30679 374 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 NUP107P57740 925 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 KCNH2Q12809 1159 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 KYNUQ16719 465 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 EFCAB12Q6NXP0 572 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 PLD3Q8IV08 490 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 JMJD4Q9H9V9 463 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 SP110Q9HB58 689 aa12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 MTO1Q9Y2Z2 717 aaKnown RBP12.83□□□□□ -0.36
PCDHGA6-201ENST00000517434 A0A1B0GTH6 734 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 FAM47DPA6NHR8 397 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ATP6V1B1P15313 513 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 GRIK1P39086 918 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 RCN1Q15293 331 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ALKBH8Q96BT7 664 aaKnown RBP12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 VTA1Q9NP79 307 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 TEKT2Q9UIF3 430 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 MCM8Q9UJA3 840 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 MOSPD1Q9UJG1 213 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 UBQLN1Q9UMX0 589 aaKnown RBP12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 AGAP1Q9UPQ3 857 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF185O15231 689 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 AP1G2O75843 785 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 SEC24DO94855 1032 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 GHRP10912 638 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 AKR1A1P14550 325 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 TAC1P20366 129 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 NCAPHQ15003 741 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 UBAP1Q9NZ09 502 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 H3BQF6 201 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 PDHXO00330 501 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 WDR47O94967 919 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ERFP50548 548 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 PPP6R3Q5H9R7 873 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ATF7IP2Q5U623 682 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 NSL1Q96IY1 281 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 TSSK1BQ9BXA7 367 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 EGFRP00533 1210 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 LRG1P02750 347 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 SERPINB8P50452 374 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 GRIN1Q05586 938 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 SLC12A1Q13621 1099 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZBTB18Q99592 522 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 MTG1Q9BT17 334 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 LIMA1Q9UHB6 759 aaKnown RBP12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 ITIH6Q6UXX5 1313 aa12.82□□□□□ -0.36
PCDHGA6-201ENST00000517434 XPO1O14980 1071 aaKnown RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZCCHC18P0CG32 403 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 RAG1P15918 1043 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 THPOP40225 353 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 HERVK_113P62684 666 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 INPP5AQ14642 412 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 CATSPER3Q86XQ3 398 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 IGDCC4Q8TDY8 1250 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 CMTM5Q96DZ9 223 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 PNKPQ96T60 521 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 PHF20Q9BVI0 1012 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ABHD16BQ9H3Z7 469 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZWILCHQ9H900 591 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 RMI1Q9H9A7 625 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 PPCSQ9HAB8 311 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 NPHS2Q9NP85 383 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 SH3BP1Q9Y3L3 701 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 CDO1Q16878 200 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 PREPLQ4J6C6 727 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 TMC5Q6UXY8 1006 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 PPM1NQ8N819 430 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 TC2NQ8N9U0 490 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 RFWD2Q8NHY2 731 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 UCMAQ8WVF2 138 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 HTATIP2Q9BUP3 242 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 SPATC1LQ9H0A9 340 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 KANSL3Q9P2N6 904 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 AHCYL1O43865 530 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 DDX5P17844 614 aaKnown RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 FGFR4P22455 802 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 RAB27AP51159 221 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 CACNA2D1P54289 1103 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 PPIL2Q13356 520 aa12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ZNF211Q13398 564 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 KRR1Q13601 381 aaKnown RBP12.81□□□□□ -0.36
PCDHGA6-201ENST00000517434 ACCSLQ4AC99 568 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms