RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 CEP95Q96GE4 821 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 RPL10LQ96L21 214 aaKnown RBP4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 YTHDC1Q96MU7 727 aaKnown RBP4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 MYOCQ99972 504 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 KATNAL1Q9BW62 490 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 INO80BQ9C086 356 aaPredicted RBP4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 TINAGL1Q9GZM7 467 aaPredicted RBP4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 MCOLN1Q9GZU1 580 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 KCNH6Q9H252 994 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 EPC1Q9H2F5 836 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 NSUN3Q9H649 340 aaKnown RBP4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 WASH6PQ9NQA3 447 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAM53CQ9NYF3 392 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 NTMQ9P121 344 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 BCCIPQ9P287 314 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 SLC23A1Q9UHI7 598 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 ZMYM3Q14202 1370 aa4.37□□□□□ -1.71
RNU6-27P-201ENST00000516146 MYOCOSA0A1B0GUC4 107 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 LOC102723971A0A1B0GUV8 181 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 PRSS29PA6NIE9 313 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 TMEM233B4DJY2 109 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 CCP110O43303 1012 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 TNFRSF6BO95407 300 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 GLP2RO95838 553 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 POMCP01189 267 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 PIM1P11309 404 aaPredicted RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 TPH1P17752 444 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 EGR1P18146 543 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 ELF1P32519 619 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 CSF2RBP32927 897 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 EPHB3P54753 998 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 EIF5P55010 431 aaKnown RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 CLRN1P58418 232 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 RAP2BP61225 183 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 MRPL49Q13405 166 aaKnown RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 EFR3AQ14156 821 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 MAPKAPK3Q16644 382 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAM160B1Q5W0V3 765 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 SULT6B1Q6IMI4 303 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 UBE3BQ7Z3V4 1068 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 FRMD5Q7Z6J6 570 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 RALYLQ86SE5 291 aaKnown RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 LRRTM4Q86VH4 590 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 C2CD5Q86YS7 1000 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 CCDC117Q8IWD4 279 aaPredicted RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 FTSJ3Q8IY81 847 aaKnown RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 OR14K1Q8NGZ2 314 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 STT3BQ8TCJ2 826 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 RABGGTAQ92696 567 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 DIRC2Q96SL1 478 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 SPATA5L1Q9BVQ7 753 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 ENKD1Q9H0I2 346 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 DHX36Q9H2U1 1008 aaKnown RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 SEPSECSQ9HD40 501 aaKnown RBP4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 IL23AQ9NPF7 189 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 SMC4Q9NTJ3 1288 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 IGSF9Q9P2J2 1179 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 XPR1Q9UBH6 696 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 CA14Q9ULX7 337 aa4.36□□□□□ -1.71
RNU6-27P-201ENST00000516146 AQP7P3A6NL99 342 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 EYA2O00167 538 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 RAB27BO00194 218 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 WNT10BO00744 389 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 KCNQ3O43525 872 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 ASNA1O43681 348 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 RNASEH2AO75792 299 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 ZNF888P0CJ79 500 aaPredicted RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 NPPBP16860 134 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 BTF3P20290 206 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 CNTFP26441 200 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 SLC6A4P31645 630 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 VIPR2P41587 438 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 RXRGP48443 463 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 CPT1AP50416 773 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 GP2P55259 537 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 MPP1Q00013 466 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 LRP8Q14114 963 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 ARHGEF7Q14155 803 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 ARHGAP15Q53QZ3 475 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 CRB2Q5IJ48 1285 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 UTP14CQ5TAP6 766 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 CRTC1Q6UUV9 634 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 CBLL1Q75N03 491 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 MOGAT3Q86VF5 341 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 SUGP1Q8IWZ8 645 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 ESX1Q8N693 406 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 FITM2Q8N6M3 262 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 PDILTQ8N807 584 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAM46DQ8NEK8 389 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 DNERQ8NFT8 737 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 ZFP28Q8NHY6 868 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 OTUD7AQ8TE49 926 aaPredicted RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 RAPGEF4Q8WZA2 1011 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAM168AQ92567 244 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 HDAC2Q92769 488 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 LIN37Q96GY3 246 aaPredicted RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 CPEB1Q9BZB8 566 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 PCDHAC1Q9H158 963 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 UBN1Q9NPG3 1134 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms