RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TRAF1Q13077 416 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 UBXN2BQ14CS0 331 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 SEPT2Q15019 361 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 FILIP1LQ4L180 1135 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 DACT2Q5SW24 774 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 C1QL3Q5VWW1 255 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 ZKSCAN2Q63HK3 967 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 AP1ARQ63HQ0 302 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 ZNF529Q6P280 563 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 FMNL3Q8IVF7 1028 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 FITM2Q8N6M3 262 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 ACRBPQ8NEB7 543 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 ANKRD20A12PQ8NF67 263 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 TMX3Q96JJ7 454 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 CAMKK2Q96RR4 588 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 CPEB1Q9BZB8 566 aaKnown RBP5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 C11orf54Q9H0W9 315 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 RNPEPQ9H4A4 650 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 KMT5AQ9NQR1 393 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 A2MP01023 1474 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 ARHGAP31Q2M1Z3 1444 aa5.3□□□□□ -1.56
HMGB3P13-201ENST00000511263 SAMD9LQ8IVG5 1584 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 TMEM191CA6NGB0 347 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 CCDC154A6NI56 674 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 DRGXA6NNA5 263 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 FZD9O00144 591 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 EXOC5O00471 708 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 HTRA2O43464 458 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCDHGA12O60330 932 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 REC8O95072 547 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 ITGB1P05556 798 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 FTH1P19P0C7X4 201 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 TGM1P22735 817 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 SMARCA1P28370 1054 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 MAP2K2P36507 400 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 ALDH1A3P47895 512 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 BLOC1S1P78537 153 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 TMED1Q13445 227 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 MTM1Q13496 603 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 FHL2Q14192 279 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PTPAQ15257 358 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 C1QTNF12Q5T7M4 302 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 ANKS6Q68DC2 871 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 TTLL5Q6EMB2 1281 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 SUGP1Q8IWZ8 645 aaKnown RBP5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 TXLNBQ8N3L3 684 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 STON2Q8WXE9 905 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 DPF2Q92785 391 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 LENG9Q96B70 501 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 RMDN2Q96LZ7 410 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PRRX2Q99811 253 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 NRDE2Q9H7Z3 1164 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 DIAPH3Q9NSV4 1193 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 CWC25Q9NXE8 425 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 ETAA1Q9NY74 926 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 RNF181Q9P0P0 153 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PNMA8BQ9ULN7 279 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 JRKLQ9Y4A0 524 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCDHGA9Q9Y5G4 932 aaKnown RBP5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCDHGA8Q9Y5G5 932 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCDHGA7Q9Y5G6 932 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCDHGA6Q9Y5G7 932 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCDHGA3Q9Y5H0 932 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 NOX1Q9Y5S8 564 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 ACTL7AQ9Y615 435 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 DNMT1P26358 1616 aaKnown RBP5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 ATRNL1Q5VV63 1379 aa5.29□□□□□ -1.56
HMGB3P13-201ENST00000511263 PREX2Q70Z35 1606 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 FAM20BO75063 409 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 PPFIA2O75334 1257 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 RPS6KA4O75676 772 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 HAUS5O94927 633 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 ABHD16AO95870 558 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 GNAI3P08754 354 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 APOBEC3AP31941 199 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 RDXP35241 583 aaKnown RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 BMPR1AP36894 532 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 SLC6A9P48067 706 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 GNAI1P63096 354 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 TAP1Q03518 808 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 PPP2R5AQ15172 486 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 TTF1Q15361 905 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 PABPC1LQ4VXU2 614 aaKnown RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 KCNV1Q6PIU1 500 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 MED25Q71SY5 747 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 GET4Q7L5D6 327 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 RHOT2Q8IXI1 618 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 CMTR2Q8IYT2 770 aaKnown RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 RNF169Q8NCN4 708 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 C3orf20Q8ND61 904 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 SLC35B2Q8TB61 432 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 MYEOVQ96EZ4 313 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 CLPTM1LQ96KA5 538 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 PHACTR3Q96KR7 559 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 FAM167AQ96KS9 214 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 MED15Q96RN5 788 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 PACSIN1Q9BY11 444 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 PANK2Q9BZ23 570 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms