RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 LRRN2O75325 713 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 RFPL2O75678 378 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 FGFR1OPO95684 399 aaKnown RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 GNA14O95837 355 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 CPB1P15086 417 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 IL9P15248 144 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 ATF2P15336 505 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 MARSP56192 900 aaKnown RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 ITIH3Q06033 890 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 GPR17Q13304 367 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 SGSM1Q2NKQ1 1148 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 KLHL40Q2TBA0 621 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 ZNF699Q32M78 642 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 CT47A1Q5JQC4 288 aaPredicted RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 RARS2Q5T160 578 aaKnown RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 TPGS2Q68CL5 300 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 CAVIN1Q6NZI2 390 aaKnown RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 SASS6Q6UVJ0 657 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 TMC5Q6UXY8 1006 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 RNF19BQ6ZMZ0 732 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 SPATA18Q8TC71 538 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 MMS19Q96T76 1030 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 ZCWPW1Q9H0M4 648 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 ADAM7Q9H2U9 754 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 SFXN1Q9H9B4 322 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 DDX43Q9NXZ2 648 aaKnown RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 NXF1Q9UBU9 619 aaKnown RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 AFF4Q9UHB7 1163 aaKnown RBP14.53□□□□□ -0.08
COL1A1-208ENST00000494334 CDH22Q9UJ99 828 aa14.53□□□□□ -0.08
COL1A1-208ENST00000494334 CCDC195A0A1B0GUA6 201 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 TACC1O75410 805 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 ZMYND10O75800 440 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 ASS1P00966 412 aaKnown RBP14.52□□□□□ -0.09
COL1A1-208ENST00000494334 C8AP07357 584 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 FAM163BP0C2L3 166 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 PTMSP20962 102 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 PIK3CAP42336 1068 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 LHX1P48742 406 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 MXI1P50539 228 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 TNNC1P63316 161 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 SMAD2Q15796 467 aaKnown RBP14.52□□□□□ -0.09
COL1A1-208ENST00000494334 UVSSAQ2YD98 709 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 CBWD6Q4V339 395 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 ZNF667Q5HYK9 610 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 TJAP1Q5JTD0 557 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 CBWD3Q5JTY5 395 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 CBWD5Q5RIA9 395 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 SPOPLQ6IQ16 392 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 ELMSAN1Q6PJG2 1045 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 LRRTM3Q86VH5 581 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 TRIM59Q8IWR1 403 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 ADGRF2Q8IZF7 708 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 CMASQ8NFW8 434 aaPredicted RBP14.52□□□□□ -0.09
COL1A1-208ENST00000494334 KBTBD7Q8WVZ9 684 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 SUSD6Q92537 303 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 TAF4BQ92750 862 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 ACBD6Q9BR61 282 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 MRPL45Q9BRJ2 306 aaKnown RBP14.52□□□□□ -0.09
COL1A1-208ENST00000494334 PI4K2AQ9BTU6 479 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 POLIQ9UNA4 740 aa14.52□□□□□ -0.09
COL1A1-208ENST00000494334 USP15Q9Y4E8 981 aaPredicted RBP14.52□□□□□ -0.09
COL1A1-208ENST00000494334 HCRTO43612 131 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 PAPLNO95428 1278 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 SEC24AO95486 1093 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 VNN2O95498 520 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 WEE2P0C1S8 567 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 CCDC192P0DO97 292 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 WARSP23381 471 aaKnown RBP14.51□□□□□ -0.09
COL1A1-208ENST00000494334 ACAT1P24752 427 aaKnown RBP14.51□□□□□ -0.09
COL1A1-208ENST00000494334 LMO2P25791 158 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 ELF1P32519 619 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 MYL7Q01449 175 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 ADCY1Q08828 1119 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 TPD52L1Q16890 204 aaPredicted RBP14.51□□□□□ -0.09
COL1A1-208ENST00000494334 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 CES5AQ6NT32 575 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 GPR149Q86SP6 731 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 IRF2BP1Q8IU81 584 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 TCEAL8Q8IYN2 117 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 FBXL13Q8NEE6 735 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 SLC7A14Q8TBB6 771 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 SEMA4DQ92854 862 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 ZNF707Q96C28 371 aaPredicted RBP14.51□□□□□ -0.09
COL1A1-208ENST00000494334 PGLYRP2Q96PD5 576 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 CYP4F11Q9HBI6 524 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 APOBEC3GQ9HC16 384 aaKnown RBP14.51□□□□□ -0.09
COL1A1-208ENST00000494334 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL1A1-208ENST00000494334 ANO10Q9NW15 660 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 RAB20Q9NX57 234 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 ZDHHC7Q9NXF8 308 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 MAFFQ9ULX9 164 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 COQ4Q9Y3A0 265 aa14.51□□□□□ -0.09
COL1A1-208ENST00000494334 PLXNA3P51805 1871 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 MTMR11A4FU01 709 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 CLSTN1O94985 981 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 FMO5P49326 533 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 CDH8P55286 799 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 STX1AQ16623 288 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 SLC39A12Q504Y0 691 aa14.5□□□□□ -0.09
COL1A1-208ENST00000494334 PPM1LQ5SGD2 360 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms