RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 MRPS18AQ9NVS2 196 aaKnown RBP4.83□□□□□ -1.64
CLK1-213ENST00000492793 ZSCAN32Q9NX65 697 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 XPR1Q9UBH6 696 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 JAG2Q9Y219 1238 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 DMTF1Q9Y222 760 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 CEP83Q9Y592 693 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 NOX1Q9Y5S8 564 aa4.83□□□□□ -1.64
CLK1-213ENST00000492793 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 CCDC195A0A1B0GUA6 201 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 FOXN3O00409 490 aaPredicted RBP4.82□□□□□ -1.64
CLK1-213ENST00000492793 TRIM24O15164 1050 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 NCR1O76036 304 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 IL18RAPO95256 599 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 HLA-DOAP06340 250 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 TNFSF4P23510 183 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 DAG1Q14118 895 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 KLHDC7AQ5VTJ3 777 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 EXTL1Q92935 676 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 GJA10Q969M2 543 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 SLC46A1Q96NT5 459 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 UNKQ9C0B0 810 aaKnown RBP4.82□□□□□ -1.64
CLK1-213ENST00000492793 ZNF518BQ9C0D4 1074 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 CERS4Q9HA82 394 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 TBC1D23Q9NUY8 699 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 PARPBPQ9NWS1 579 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 RAD54BQ9Y620 910 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 FPGT-TNNI3KV9GXZ4 949 aa4.82□□□□□ -1.64
CLK1-213ENST00000492793 RASA4BC9J798 803 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 F8W8V4 182 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 PYCARD-AS1I3L0S3 204 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 RNASET2O00584 256 aaKnown RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 RASA4O43374 803 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 NDUFA10O95299 355 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 LDHAP00338 332 aaKnown RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 ALDH5A1P51649 535 aaPredicted RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 CASP5P51878 434 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 ARFIP2P53365 341 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 OCA2Q04671 838 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 KRT17Q04695 432 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 FPGSQ05932 587 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 ZNF543Q08ER8 600 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 GRM1Q13255 1194 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 IQCB1Q15051 598 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 LONRF3Q496Y0 759 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 SPDYAQ5MJ70 313 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 C10orf62Q5T681 223 aaPredicted RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 DCAF12L1Q5VU92 463 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 METRNLQ641Q3 311 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 XRRA1Q6P2D8 792 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 HTR3DQ70Z44 454 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 DPP9Q86TI2 863 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 TMPRSS6Q8IU80 811 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 TTC9BQ8N6N2 239 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 PSD4Q8NDX1 1056 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 MAML1Q92585 1016 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 DVL3Q92997 716 aaPredicted RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 TMEM125Q96AQ2 219 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 NMD3Q96D46 503 aaKnown RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 IQCDQ96DY2 449 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 MOGAT1Q96PD6 335 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 PLEKHG4BQ96PX9 1271 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 ZNF768Q9H5H4 540 aaKnown RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 SMURF2Q9HAU4 748 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 A1CFQ9NQ94 594 aaKnown RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 AURKAIP1Q9NWT8 199 aaPredicted RBP4.81□□□□□ -1.64
CLK1-213ENST00000492793 COL20A1Q9P218 1284 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 FNIP2Q9P278 1114 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 HSFX1Q9UBD0 423 aa4.81□□□□□ -1.64
CLK1-213ENST00000492793 CCDC78A2IDD5 438 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 TRIM43BA6NCK2 446 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 AHRRA9YTQ3 701 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 F5H697 171 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 APOL1O14791 398 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 TPD52L2O43399 206 aaKnown RBP4.8□□□□□ -1.64
CLK1-213ENST00000492793 NCK2O43639 380 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 XRCC6P12956 609 aaKnown RBP eCLIP4.8□□□□□ -1.64
CLK1-213ENST00000492793 KCNA2P16389 499 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 ITGALP20701 1170 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 SERPINB3P29508 390 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 MAGEA10P43363 369 aaPredicted RBP4.8□□□□□ -1.64
CLK1-213ENST00000492793 CARSP49589 748 aaKnown RBP4.8□□□□□ -1.64
CLK1-213ENST00000492793 MAPK10P53779 464 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 RESTQ13127 1097 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 CD300EQ496F6 205 aaPredicted RBP4.8□□□□□ -1.64
CLK1-213ENST00000492793 RRAGBQ5VZM2 374 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 TAF2Q6P1X5 1199 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 UNC13DQ70J99 1090 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 RNF44Q7L0R7 432 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 CLNKQ7Z7G1 428 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 TXLNBQ8N3L3 684 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 TMEM132CQ8N3T6 1108 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 ZNF276Q8N554 614 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 OR2C3Q8N628 320 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 IPCEF1Q8WWN9 437 aaPredicted RBP4.8□□□□□ -1.64
CLK1-213ENST00000492793 SPSB4Q96A44 273 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 TRIM43Q96BQ3 446 aaPredicted RBP4.8□□□□□ -1.64
CLK1-213ENST00000492793 SNX22Q96L94 193 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms