RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MOGAT1Q96PD6 335 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 VKORC1Q9BQB6 163 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 TBCCD1Q9NVR7 557 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 OGDHLQ9ULD0 1010 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 AGAP1Q9UPQ3 857 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 FAM50BQ9Y247 325 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 MED16Q9Y2X0 877 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 TMX2Q9Y320 296 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 RAD54BQ9Y620 910 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 HS3ST3A1Q9Y663 406 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 PRAMEF33A0A0G2JMD5 474 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 CENPVL1A0A0U1RR11 272 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 CCDC78A2IDD5 438 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 PRAMEF10O60809 474 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 SPDEFO95238 335 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 THP07101 528 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 ITGAMP11215 1152 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 CHRM3P20309 590 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 ITGALP20701 1170 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 GNALP38405 381 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 ANXA11P50995 505 aaKnown RBP6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 VAV2P52735 878 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 TP53BP2Q13625 1128 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 POLD3Q15054 466 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 CYP2A13Q16696 494 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 COBLL1Q53SF7 1204 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 LMBRD2Q68DH5 695 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 APOA5Q6Q788 366 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 MRGPREQ86SM8 312 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 GGNQ86UU5 652 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 ARHGEF19Q8IW93 802 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 MPP5Q8N3R9 675 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 IL31RAQ8NI17 732 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 SNX19Q92543 992 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 PTCD3Q96EY7 689 aaKnown RBP6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 C22orf23Q9BZE7 217 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 KIAA1586Q9HCI6 787 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 PCDHGB6Q9Y5F9 930 aa6.05□□□□□ -1.44
HMGB1P38-201ENST00000490557 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 A0A1W2PS29 197 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 BTN3A1O00481 513 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 NARSO43776 548 aaKnown RBP6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 SOAT2O75908 522 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 NBPF7P0C2Y1 421 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 ZFP36P26651 326 aaKnown RBP6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 TBX4P57082 545 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 ZXDAP98168 799 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 SLC13A2Q13183 592 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 RAB32Q13637 225 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 CD300EQ496F6 205 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 FNDC7Q5VTL7 733 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 SWSAP1Q6NVH7 229 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 COL23A1Q86Y22 540 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 ADAM2Q99965 735 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 MLST8Q9BVC4 326 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 TRIM54Q9BYV2 358 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 TTYH3Q9C0H2 523 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 BHMT2Q9H2M3 363 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 ATP6V0A4Q9HBG4 840 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 CYP4F11Q9HBI6 524 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 ZNF287Q9HBT7 754 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 CASS4Q9NQ75 786 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 TMEM74BQ9NUR3 256 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 CTTNBP2NLQ9P2B4 639 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 DMTF1Q9Y222 760 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 PAXBP1Q9Y5B6 917 aa6.04□□□□□ -1.44
HMGB1P38-201ENST00000490557 ISM1B1AKI9 464 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 E7ENX8 843 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 F5H697 171 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 FRS3O43559 492 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 PQBP1O60828 265 aaKnown RBP6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 SUN1O94901 812 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 MYL1P05976 194 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 ZKSCAN1P17029 563 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 EN2P19622 333 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 GDF5P43026 501 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 SUMO3P55854 103 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 MC2RQ01718 297 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 TAP2Q03519 686 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 DYRK1AQ13627 763 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 LONRF3Q496Y0 759 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 ABHD17BQ5VST6 288 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 TAF2Q6P1X5 1199 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 RHOUQ7L0Q8 258 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 NEU4Q8WWR8 484 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 ANKS1AQ92625 1134 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 NACC2Q96BF6 587 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 HEPHQ9BQS7 1158 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 SARGQ9BW04 601 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 WDR11Q9BZH6 1224 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 NUP62CLQ9H1M0 184 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 SERHL2Q9H4I8 314 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 SACM1LQ9NTJ5 587 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 INTS13Q9NVM9 706 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 SNX13Q9Y5W8 968 aa6.03□□□□□ -1.44
HMGB1P38-201ENST00000490557 TTBK1Q5TCY1 1321 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 TBX3O15119 743 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 TRIAP1O43715 76 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 DNAJB5O75953 348 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms