RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ZMYND10O75800 440 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 CST3P01034 146 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-212ENST00000489728 CPB1P15086 417 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 PCSK1P29120 753 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 MTHFRP42898 656 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 TNNC1P63316 161 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 MYL7Q01449 175 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 TFF2Q03403 129 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 PPP3CAQ08209 521 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 GPR17Q13304 367 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 SMAD2Q15796 467 aaKnown RBP11.89□□□□□ -0.51
CPSF7-212ENST00000489728 KLHL40Q2TBA0 621 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 ZNF699Q32M78 642 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 DPCR1Q3MIW9 517 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 WSCD1Q658N2 575 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-212ENST00000489728 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-212ENST00000489728 PALB2Q86YC2 1186 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 TCEAL8Q8IYN2 117 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 ADGRF2Q8IZF7 708 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 RIPOR3Q96MK2 946 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 ACBD6Q9BR61 282 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 L1RE1Q9UN81 338 aa11.89□□□□□ -0.51
CPSF7-212ENST00000489728 WDR27A2RRH5 827 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 P4HA2O15460 535 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 VNN1O95497 513 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 ASS1P00966 412 aaKnown RBP11.88□□□□□ -0.51
CPSF7-212ENST00000489728 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 BMP1P13497 986 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 WARSP23381 471 aaKnown RBP11.88□□□□□ -0.51
CPSF7-212ENST00000489728 PIK3CAP42336 1068 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 GCLMP48507 274 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 MXI1P50539 228 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 MYL6P60660 151 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 RBM10P98175 930 aaKnown RBP11.88□□□□□ -0.51
CPSF7-212ENST00000489728 TSPY1Q01534 308 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 CBX2Q14781 532 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-212ENST00000489728 SOWAHAQ2M3V2 549 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 WDR72Q3MJ13 1102 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 CCDC40Q4G0X9 1142 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 ZNF667Q5HYK9 610 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 SASS6Q6UVJ0 657 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 GPR149Q86SP6 731 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 GLYCTKQ8IVS8 523 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 DCP1BQ8IZD4 617 aaKnown RBP11.88□□□□□ -0.51
CPSF7-212ENST00000489728 CCDC150Q8NCX0 1101 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 FAM84AQ96KN4 292 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 ZCWPW1Q9H0M4 648 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 THAP9Q9H5L6 903 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 ANO10Q9NW15 660 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 COQ4Q9Y3A0 265 aa11.88□□□□□ -0.51
CPSF7-212ENST00000489728 USP15Q9Y4E8 981 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-212ENST00000489728 TIMM13Q9Y5L4 95 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-212ENST00000489728 PRRG1O14668 218 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 XYLBO75191 536 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 LETM1O95202 739 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-212ENST00000489728 HLA-DRAP01903 254 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 C8AP07357 584 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 ELF1P32519 619 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 KCNQ1P51787 676 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 CETN1Q12798 172 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 PLD1Q13393 1074 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 MAPRE1Q15691 268 aaKnown RBP11.87□□□□□ -0.51
CPSF7-212ENST00000489728 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-212ENST00000489728 STX1AQ16623 288 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 DCAF17Q5H9S7 520 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-212ENST00000489728 PPM1LQ5SGD2 360 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 ATAT1Q5SQI0 421 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 TCERG1LQ5VWI1 586 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 FAM114A1Q8IWE2 563 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 TRIM59Q8IWR1 403 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 TTC39CQ8N584 583 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 FBXL13Q8NEE6 735 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 OR10T2Q8NGX3 314 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 SPPL2BQ8TCT7 592 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 KBTBD7Q8WVZ9 684 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 EEF2KMTQ96G04 330 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 RTP3Q9BQQ7 232 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
CPSF7-212ENST00000489728 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 ABCB6Q9NP58 842 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 CDH9Q9ULB4 789 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 DENND4AQ7Z401 1863 aa11.87□□□□□ -0.51
CPSF7-212ENST00000489728 CCDC195A0A1B0GUA6 201 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 TRIM21P19474 475 aaKnown RBP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 STX17P56962 302 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 ADCY1Q08828 1119 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 CLUL1Q15846 466 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 RARS2Q5T160 578 aaKnown RBP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 RNF19BQ6ZMZ0 732 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 ADHFE1Q8IWW8 467 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 SLC7A14Q8TBB6 771 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms