RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.01
VTI1A-206ENST00000489142 HCRTO43612 131 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 MOSPD3O75425 235 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 TMEM191BP0C7N4 346 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 CLCN5P51795 746 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 EHHADHQ08426 723 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 SNW1Q13573 536 aaKnown RBP15.11■□□□□ 0.01
VTI1A-206ENST00000489142 TEAD2Q15562 447 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 FAM78AQ5JUQ0 283 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 CYP4A22Q5TCH4 519 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 TANGO2Q6ICL3 276 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 LRRTM3Q86VH5 581 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 NT5DC4Q86YG4 428 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 GPIHBP1Q8IV16 184 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 CEP57L1Q8IYX8 460 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 OR5B17Q8NGF7 314 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 CXorf38Q8TB03 319 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 ZNF507Q8TCN5 953 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
VTI1A-206ENST00000489142 PAGE5Q96GU1 130 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 LPIN3Q9BQK8 851 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 OXCT2Q9BYC2 517 aaPredicted RBP15.11■□□□□ 0.01
VTI1A-206ENST00000489142 ZCWPW1Q9H0M4 648 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 MAGEF1Q9HAY2 307 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 ARHGEF3Q9NR81 526 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 SLC2A4RGQ9NR83 387 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 AGPAT3Q9NRZ7 376 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 SIX4Q9UIU6 781 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 TICRRQ7Z2Z1 1910 aa15.11■□□□□ 0.01
VTI1A-206ENST00000489142 A0A1W2PRU2 124 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 GALR2O43603 387 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-206ENST00000489142 AOC1P19801 751 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 FCARP24071 287 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 ACAT1P24752 427 aaKnown RBP15.1■□□□□ 0.01
VTI1A-206ENST00000489142 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-206ENST00000489142 ALDH1A3P47895 512 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 EPHB3P54753 998 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 KRT85P78386 507 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 GRM2Q14416 872 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 CCDC142Q17RM4 750 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 STXBP5Q5T5C0 1151 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 PDCL2Q8N4E4 241 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 STKLD1Q8NE28 680 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 SHKBP1Q8TBC3 707 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 FOXQ1Q9C009 403 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 ZNF334Q9HCZ1 680 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-206ENST00000489142 ABI2Q9NYB9 513 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-206ENST00000489142 GDE1Q9NZC3 331 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 ITGA11Q9UKX5 1188 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 DSEQ9UL01 958 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 MAFFQ9ULX9 164 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 L1RE1Q9UN81 338 aa15.1■□□□□ 0.01
VTI1A-206ENST00000489142 ZNF233A6NK53 670 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 ZNF197O14709 1029 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 KLRC4O43908 158 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 DCNP07585 359 aaKnown RBP15.09■□□□□ 0.01
VTI1A-206ENST00000489142 SLFN14P0C7P3 912 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
VTI1A-206ENST00000489142 PAX3P23760 479 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 PNPLA4P41247 253 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 MRE11P49959 708 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 PLD1Q13393 1074 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 SNRNP35Q16560 246 aaKnown RBP15.09■□□□□ 0.01
VTI1A-206ENST00000489142 MGAT5BQ3V5L5 792 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 OSTM1Q86WC4 334 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 TMC8Q8IU68 726 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 THEM5Q8N1Q8 247 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 FAM200AQ8TCP9 573 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 ATOH1Q92858 354 aaPredicted RBP15.09■□□□□ 0.01
VTI1A-206ENST00000489142 ANKRD36BP1Q96IX9 119 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 PRRX2Q99811 253 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 LRRC3Q9BY71 257 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 SLITRK6Q9H5Y7 841 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 TMLHEQ9NVH6 421 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 INTS13Q9NVM9 706 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 SNX9Q9Y5X1 595 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 NCANO14594 1321 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 UBE4BO95155 1302 aa15.09■□□□□ 0.01
VTI1A-206ENST00000489142 OBSL1O75147 1896 aa15.08■□□□□ 0.01
VTI1A-206ENST00000489142 PVALEFA0A1B0GWK0 134 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 KIAA0391O15091 583 aaKnown RBP15.08■□□□□ 0
VTI1A-206ENST00000489142 LRRN2O75325 713 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 ECI2O75521 394 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 PRR29P0C7W0 189 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 ATF6P18850 670 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 CD72P21854 359 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 CMA1P23946 247 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 VIPR2P41587 438 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 GPR15P49685 360 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 NDUFA8P51970 172 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 EPHA5P54756 1037 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 RBP5P82980 135 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 STK4Q13043 487 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 KMT5BQ4FZB7 885 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 DNAJB7Q7Z6W7 309 aaPredicted RBP15.08■□□□□ 0
VTI1A-206ENST00000489142 KIAA0895Q8NCT3 520 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 ZSCAN18Q8TBC5 510 aaPredicted RBP15.08■□□□□ 0
VTI1A-206ENST00000489142 GIPC2Q8TF65 315 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 CCDC127Q96BQ5 260 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms