RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 SLC39A12Q504Y0 691 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 WSCD1Q658N2 575 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 VITQ6UXI7 678 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 ZNF852Q6ZMS4 543 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 ITIH5Q86UX2 942 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 MFSD6LQ8IWD5 586 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 BRSK2Q8IWQ3 736 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 TTC9BQ8N6N2 239 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 ZSWIM2Q8NEG5 633 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 ZSCAN18Q8TBC5 510 aaPredicted RBP10.18□□□□□ -0.78
NUP50-215ENST00000484186 CACTINQ8WUQ7 758 aaKnown RBP10.18□□□□□ -0.78
NUP50-215ENST00000484186 DEPDC1BQ8WUY9 529 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 PSMG2Q969U7 264 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 SAAL1Q96ER3 474 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 ZNF560Q96MR9 790 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 FGFBP2Q9BYJ0 223 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 SEMA4AQ9H3S1 761 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 CUEDC2Q9H467 287 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 SLITRK6Q9H5Y7 841 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 ZNF334Q9HCZ1 680 aaPredicted RBP10.18□□□□□ -0.78
NUP50-215ENST00000484186 TRPV5Q9NQA5 729 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 AGAP1Q9UPQ3 857 aa10.18□□□□□ -0.78
NUP50-215ENST00000484186 MRPS17Q9Y2R5 130 aaKnown RBP10.18□□□□□ -0.78
NUP50-215ENST00000484186 GOLGA8IPA6NC78 632 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 SHISA7A6NL88 538 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 GOLGA8JA6NMD2 632 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 HEPACAM2A8MVW5 462 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 ZNF263O14978 683 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 LAMTOR5O43504 91 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 EXTL3O43909 919 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 CUTAO60888 179 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 SOAT2O75908 522 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 YEATS4O95619 227 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 FGF19O95750 216 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 TARSP26639 723 aaKnown RBP10.17□□□□□ -0.78
NUP50-215ENST00000484186 GDI1P31150 447 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 AMPD3Q01432 767 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 FZD5Q13467 585 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 E2F4Q16254 413 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 STXBP4Q6ZWJ1 553 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 GAREM2Q75VX8 874 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 LRRTM3Q86VH5 581 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 DCP1BQ8IZD4 617 aaKnown RBP10.17□□□□□ -0.78
NUP50-215ENST00000484186 MAML2Q8IZL2 1156 aaPredicted RBP10.17□□□□□ -0.78
NUP50-215ENST00000484186 ADSSL1Q8N142 457 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 C1orf127Q8N9H9 656 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 FAM200AQ8TCP9 573 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 SPPL2BQ8TCT7 592 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 C2orf15Q8WU43 125 aaKnown RBP10.17□□□□□ -0.78
NUP50-215ENST00000484186 CLDN23Q96B33 292 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 SEPT5Q99719 369 aaPredicted RBP10.17□□□□□ -0.78
NUP50-215ENST00000484186 CBWD1Q9BRT8 395 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 TNMDQ9H2S6 317 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 ATXN3LQ9H3M9 355 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 PCIF1Q9H4Z3 704 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 KBTBD4Q9NVX7 518 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 SPATA6Q9NWH7 488 aaPredicted RBP10.17□□□□□ -0.78
NUP50-215ENST00000484186 RBAKQ9NYW8 714 aaPredicted RBP10.17□□□□□ -0.78
NUP50-215ENST00000484186 R4GN57 208 aa10.17□□□□□ -0.78
NUP50-215ENST00000484186 USP34Q70CQ2 3546 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 SCN1AP35498 2009 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 DMDP11532 3685 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 KIAA0391O15091 583 aaKnown RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 HUS1O60921 280 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 LMNAP02545 664 aaKnown RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 ITGB3P05106 788 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 HAPLN1P10915 354 aaPredicted RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 GABRR2P28476 465 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 POLR2BP30876 1174 aaKnown RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 RPS9P46781 194 aaKnown RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 CDR1P51861 262 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 VEPH1Q14D04 833 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 TAF12Q16514 161 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 ZNF528Q3MIS6 628 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 MGAT5BQ3V5L5 792 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 FOXD4L5Q5VV16 416 aaPredicted RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 ZC3H14Q6PJT7 736 aaKnown RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 ARID3BQ8IVW6 561 aaPredicted RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 YAF2Q8IY57 180 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 GPD1LQ8N335 351 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 CSGALNACT2Q8N6G5 542 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 IQUBQ8NA54 791 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 CXorf38Q8TB03 319 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 KCNG4Q8TDN1 519 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 FOXD4L4Q8WXT5 416 aaPredicted RBP10.16□□□□□ -0.78
NUP50-215ENST00000484186 DHX58Q96C10 678 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 LPIN3Q9BQK8 851 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 TRIM9Q9C026 710 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 PDE11AQ9HCR9 933 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 ITGA11Q9UKX5 1188 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 ANK1P16157 1881 aa10.16□□□□□ -0.78
NUP50-215ENST00000484186 MYO15AQ9UKN7 3530 aa10.15□□□□□ -0.78
NUP50-215ENST00000484186 NCANO14594 1321 aa10.15□□□□□ -0.78
NUP50-215ENST00000484186 PTPRZ1P23471 2315 aaPredicted RBP10.15□□□□□ -0.78
NUP50-215ENST00000484186 ZNF233A6NK53 670 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms