RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 EHD1Q9H4M9 534 aa5.65□□□□□ -1.5
USF3-202ENST00000478658 VCPKMTQ9H867 229 aa5.65□□□□□ -1.5
USF3-202ENST00000478658 TDRKHQ9Y2W6 561 aaKnown RBP5.65□□□□□ -1.5
USF3-202ENST00000478658 EXOC1LA0A1B0GW35 172 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 SH3D21A4FU49 640 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 CHURC1-FNTBB4DL54 471 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 STX16-NPEPL1H3BU86 382 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 STX16O14662 325 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 H2AFZP0C0S5 128 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 SLC2A3P11169 496 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 RIDAP52758 137 aaKnown RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 EFNA5P52803 228 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 EPHB4P54760 987 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 OLR1P78380 273 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 NFE2L1Q14494 772 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 COLEC12Q5KU26 742 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 H2AFVQ71UI9 128 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 APBB2Q92870 758 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 OSBP2Q969R2 916 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 DHX58Q96C10 678 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 ARMT1Q9H993 441 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 THG1LQ9NWX6 298 aaKnown RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 PCDHGC3Q9UN70 934 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 KIF24Q5T7B8 1368 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 DENND3A2RUS2 1198 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 TRIM64BA6NI03 449 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 RHOXF2BP0C7M4 288 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 PNMA6AP0CW24 399 aaPredicted RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 RNF144AP50876 292 aaPredicted RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 UBXN2AP68543 259 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 SWI5Q1ZZU3 235 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 PIK3C3Q8NEB9 887 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 BEST2Q8NFU1 509 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 SGCDQ92629 289 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 SCGB3A2Q96PL1 93 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 RHOXF2Q9BQY4 288 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 UNC45AQ9H3U1 944 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 TBC1D7Q9P0N9 293 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 FBXO40Q9UH90 709 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 NFE2L3Q9Y4A8 694 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 KDRP35968 1356 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 ABCC5O15440 1437 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 KIAA0391O15091 583 aaKnown RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 KPNA5O15131 536 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 AVILO75366 819 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 FCER2P06734 321 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 ACLYP53396 1101 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 IRX1P78414 480 aaPredicted RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 MAD2L1Q13257 205 aaPredicted RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 KIZQ2M2Z5 673 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 C1orf189Q5VU69 101 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 PRMT9Q6P2P2 845 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 CDKL3Q8IVW4 592 aaPredicted RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 NARS2Q96I59 477 aaKnown RBP5.65□□□□□ -1.51
USF3-202ENST00000478658 NDST4Q9H3R1 872 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 SH3GLB2Q9NR46 395 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 USP40Q9NVE5 1235 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 DNPEPQ9ULA0 475 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 PCDHA12Q9UN75 941 aa5.65□□□□□ -1.51
USF3-202ENST00000478658 BORCS7-ASMTA0A0B4J1R7 106 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 OR6A2O95222 327 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 NR2C1P13056 603 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CHRNA3P32297 505 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PICALMQ13492 652 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PTPN20Q4JDL3 420 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 AFTPHQ6ULP2 937 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.64□□□□□ -1.51
USF3-202ENST00000478658 MYOCDQ8IZQ8 938 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 JARID2Q92833 1246 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 BORCS7Q96B45 105 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 FAF2Q96CS3 445 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ACCSQ96QU6 501 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 EXO5Q9H790 373 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PNPLA8Q9NP80 782 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 TTC7AQ9ULT0 858 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 SPATA2Q9UM82 520 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 RUVBL2Q9Y230 463 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 ARIH1Q9Y4X5 557 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 KIF1BO60333 1816 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CUL7Q14999 1698 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 WRBO00258 174 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SLC26A4O43511 780 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 LPLP06858 475 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ENO2P09104 434 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 SPIRE1Q08AE8 756 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PTK6Q13882 451 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ZNF235Q14590 738 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 FAM102BQ5T8I3 360 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 UNQ6126/PRO20091Q6UXV3 157 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ENOSF1Q7L5Y1 443 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SPATA2LQ8IUW3 424 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 COLGALT2Q8IYK4 626 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.64□□□□□ -1.51
USF3-202ENST00000478658 PYROXD1Q8WU10 500 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PGBD4Q96DM1 585 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 TCEANC2Q96MN5 208 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ZNF560Q96MR9 790 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 QRFPRQ96P65 431 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ZNF214Q9UL59 606 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 GSTK1Q9Y2Q3 226 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms