RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CEP68Q76N32 757 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 TTC30BQ8N4P2 665 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 MAGOHBQ96A72 148 aaKnown RBP4.86□□□□□ -1.63
CCNL1-215ENST00000474539 SMARCD1Q96GM5 515 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 L3MBTL3Q96JM7 780 aaPredicted RBP4.86□□□□□ -1.63
CCNL1-215ENST00000474539 ADGRE3Q9BY15 652 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 LMAN2LQ9H0V9 348 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.86□□□□□ -1.63
CCNL1-215ENST00000474539 SENP1Q9P0U3 644 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 MAN1B1Q9UKM7 699 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 PCDHGB4Q9UN71 923 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 AAR2Q9Y312 384 aaKnown RBP4.86□□□□□ -1.63
CCNL1-215ENST00000474539 MRC1P22897 1456 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 KIF13AQ9H1H9 1805 aa4.86□□□□□ -1.63
CCNL1-215ENST00000474539 ARHGAP10A1A4S6 786 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 POTECB2RU33 542 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 H0Y626 953 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ZBTB22O15209 634 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TLR2O60603 784 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 BAIAP3O94812 1187 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ASMTLO95671 621 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PYGBP11216 843 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 MTHFRP42898 656 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ROR1Q01973 937 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 MED21Q13503 144 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PGM5Q15124 567 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TCEA2Q15560 299 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TCP11X2Q5H9J9 407 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF697Q5TEC3 545 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TTC39BQ5VTQ0 682 aaPredicted RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 BSPRYQ5W0U4 402 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 LRRC8EQ6NSJ5 796 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ALKBH5Q6P6C2 394 aaKnown RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SCARA5Q6ZMJ2 495 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SPPL2BQ8TCT7 592 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 RASGRP4Q8TDF6 673 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PIGOQ8TEQ8 1089 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 WHAMMQ8TF30 809 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SNX19Q92543 992 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TTC17Q96AE7 1141 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 C18orf25Q96B23 403 aaPredicted RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PGBD1Q96JS3 809 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 NECTIN4Q96NY8 510 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TBCBQ99426 244 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 FGFR1OP2Q9NVK5 253 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SRRDQ9UH36 339 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PTCH2Q9Y6C5 1203 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TLDC2A0PJX2 215 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 FZD9O00144 591 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ATP8B1O43520 1251 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 GLUD1P00367 558 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PAEPP09466 180 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 CPA1P15085 419 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ADORA2BP29275 332 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 INPP5BP32019 993 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 HALP42357 657 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 FNTAP49354 379 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SNRNP35Q16560 246 aaKnown RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 WDR72Q3MJ13 1102 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 GPR158Q5T848 1215 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 OVOS1Q6IE37 1185 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 RTL10Q7L3V2 364 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 LPCAT2Q7L5N7 544 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ACRBPQ8NEB7 543 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PXYLP1Q8TE99 480 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 RIT1Q92963 219 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TMEM175Q9BSA9 504 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 CELF4Q9BZC1 486 aaKnown RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 HIPK3Q9H422 1215 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 WDR41Q9HAD4 459 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 DMAP1Q9NPF5 467 aaPredicted RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TBX20Q9UMR3 447 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 CLIC4Q9Y696 253 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 CNTNAP5Q8WYK1 1306 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 C2orf81A6NN90 581 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 H3BMM5 538 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 KPNA5O15131 536 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 B3GAT3O94766 335 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 IGSF6O95976 241 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 USP17L7P0C7H9 530 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PYGMP11217 842 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 BRD2P25440 801 aaKnown RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 CHRNA3P32297 505 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 AIF1P55008 147 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SNX1Q13596 522 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SH3D19Q5HYK7 790 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 NOMO2Q5JPE7 1267 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ANKS6Q68DC2 871 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 TTC19Q6DKK2 380 aaPredicted RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 CYB5R4Q7L1T6 521 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 NPAS4Q8IUM7 802 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ADGRF2Q8IZF7 708 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 B3GALNT2Q8NCR0 500 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ARMC2Q8NEN0 867 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ACDQ96AP0 544 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 LENG9Q96B70 501 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 SERPINI1Q99574 410 aa4.85□□□□□ -1.63
CCNL1-215ENST00000474539 PRPF18Q99633 342 aaKnown RBP4.85□□□□□ -1.63
CCNL1-215ENST00000474539 ARHGAP39Q9C0H5 1083 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms