RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 BRMS1Q9HCU9 246 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 GKN1Q9NS71 199 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 SLC8A2Q9UPR5 921 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 ASB3Q9Y575 518 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 CDX4O14627 284 aaPredicted RBP12.92□□□□□ -0.34
HCFC1-204ENST00000461098 RNF40O75150 1001 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 LARGE1O95461 756 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 EGFP01133 1207 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 MUTP22033 750 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
HCFC1-204ENST00000461098 ALDH1A3P47895 512 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 MCM2P49736 904 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 SPAG1Q07617 926 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 MAPK7Q13164 816 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 SH3PXD2AQ5TCZ1 1133 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 NAIF1Q69YI7 327 aaPredicted RBP12.92□□□□□ -0.34
HCFC1-204ENST00000461098 TRIM68Q6AZZ1 485 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 LRSAM1Q6UWE0 723 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 NUP205Q92621 2012 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
HCFC1-204ENST00000461098 HHIPQ96QV1 700 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 LPIN3Q9BQK8 851 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 SCNM1Q9BWG6 230 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
HCFC1-204ENST00000461098 HAPLN2Q9GZV7 340 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 KIAA1549LQ6ZVL6 1849 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 DENND4CQ5VZ89 1909 aa12.92□□□□□ -0.34
HCFC1-204ENST00000461098 MYO16Q9Y6X6 1858 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 ABCA7Q8IZY2 2146 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 TSC2P49815 1807 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 TMEM8BA6NDV4 472 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 OR6C75A6NL08 312 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 CCDC169A6NNP5 214 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 ATG13O75143 517 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 CAVIN2O95810 425 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 ATF6P18850 670 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 CREB5Q02930 508 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 RING1Q06587 406 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 GRSF1Q12849 480 aaKnown RBP eCLIP12.91□□□□□ -0.34
HCFC1-204ENST00000461098 RUNX3Q13761 415 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 MYBPC2Q14324 1141 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 NECAB1Q8N987 351 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 TCHPQ9BT92 498 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 EBF3Q9H4W6 596 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 HSFX1Q9UBD0 423 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 EBF1Q9UH73 591 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 CCL26Q9Y258 94 aa12.91□□□□□ -0.34
HCFC1-204ENST00000461098 TTC26A0AVF1 554 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 PPEF2O14830 753 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 HIP1RO75146 1068 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 FGF19O95750 216 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 OR52Z1P0C646 297 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 CXCL8P10145 99 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
HCFC1-204ENST00000461098 CEACAM1P13688 526 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 GALK1P51570 392 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 CDR1P51861 262 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 ARHGAP15Q53QZ3 475 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 CMTM8Q8IZV2 173 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 C4orf32Q8N8J7 132 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 NSUN7Q8NE18 718 aaKnown RBP12.9□□□□□ -0.34
HCFC1-204ENST00000461098 OR10T2Q8NGX3 314 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 ERMNQ8TAM6 284 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
HCFC1-204ENST00000461098 THG1LQ9NWX6 298 aaKnown RBP12.9□□□□□ -0.34
HCFC1-204ENST00000461098 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 KIAA1024Q9UPX6 916 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 ANK1P16157 1881 aa12.9□□□□□ -0.34
HCFC1-204ENST00000461098 PATE3B3GLJ2 98 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 SLC16A4O15374 487 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 JAK2O60674 1132 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 TOM1L1O75674 476 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 RHOBTB1O94844 696 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 ARSAP15289 507 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 TYMPP19971 482 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 CYP3A5P20815 502 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 CSRP1P21291 193 aaKnown RBP12.89□□□□□ -0.35
HCFC1-204ENST00000461098 U2AF2P26368 475 aaKnown RBP eCLIP12.89□□□□□ -0.35
HCFC1-204ENST00000461098 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
HCFC1-204ENST00000461098 FOSBP53539 338 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 MCL1Q07820 350 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 NOLC1Q14978 699 aaKnown RBP eCLIP12.89□□□□□ -0.35
HCFC1-204ENST00000461098 PTPAQ15257 358 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 ZNF174Q15697 407 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 ME3Q16798 604 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 DAB2IPQ5VWQ8 1189 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 OVOS1Q6IE37 1185 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 SYT13Q7L8C5 426 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 ITIH5Q86UX2 942 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 RPLP0P6Q8NHW5 317 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 USP13Q92995 863 aaPredicted RBP12.89□□□□□ -0.35
HCFC1-204ENST00000461098 RUSC1Q9BVN2 902 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 PLEKHA5Q9HAU0 1116 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 KMT5AQ9NQR1 393 aa12.89□□□□□ -0.35
HCFC1-204ENST00000461098 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
HCFC1-204ENST00000461098 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms