RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ASB3Q9Y575 518 aa18.74■□□□□ 0.59
UBE2D4-209ENST00000454428 ABCA7Q8IZY2 2146 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 LNP1A1A4G5 178 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 TRDMT1O14717 391 aaKnown RBP18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 RNF40O75150 1001 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 LARGE1O95461 756 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 EGFP01133 1207 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 HARSP12081 509 aaKnown RBP18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 MUTP22033 750 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 LRPAP1P30533 357 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 ALDH1A3P47895 512 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 MCM2P49736 904 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 FOSBP53539 338 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 SPAG1Q07617 926 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 MAPK7Q13164 816 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 SH3PXD2AQ5TCZ1 1133 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 NAIF1Q69YI7 327 aaPredicted RBP18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 ERMNQ8TAM6 284 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 RIN3Q8TB24 985 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 HHIPQ96QV1 700 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 LPIN3Q9BQK8 851 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 SLC46A2Q9BY10 475 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 OXCT2Q9BYC2 517 aaPredicted RBP18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 TASP1Q9H6P5 420 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 GKN1Q9NS71 199 aa18.73■□□□□ 0.59
UBE2D4-209ENST00000454428 CELSR3Q9NYQ7 3312 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 OBSL1O75147 1896 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 BCLAF3A2AJT9 711 aaKnown RBP18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 OR6C75A6NL08 312 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 SRRM3A6NNA2 597 aaPredicted RBP18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 ZBTB6Q15916 424 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 TRIM68Q6AZZ1 485 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 CAMKK1Q8N5S9 505 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 NSUN7Q8NE18 718 aaKnown RBP18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 EZH1Q92800 747 aaPredicted RBP18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 TCHPQ9BT92 498 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 HAPLN2Q9GZV7 340 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 CCL26Q9Y258 94 aa18.72■□□□□ 0.59
UBE2D4-209ENST00000454428 PPEF2O14830 753 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 JAK2O60674 1132 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 ATG13O75143 517 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 HIP1RO75146 1068 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 CAVIN2O95810 425 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 OR52Z1P0C646 297 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 CXCL8P10145 99 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 ATF6P18850 670 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 CREB5Q02930 508 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 GRSF1Q12849 480 aaKnown RBP eCLIP18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 ARHGAP15Q53QZ3 475 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 EBF3Q9H4W6 596 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 KMT5AQ9NQR1 393 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 KIAA1024Q9UPX6 916 aa18.71■□□□□ 0.59
UBE2D4-209ENST00000454428 CDX4O14627 284 aaPredicted RBP18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 FGF19O95750 216 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 CCT6AP40227 531 aaKnown RBP18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 GUCY2FP51841 1108 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 CDR1P51861 262 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 RUNX3Q13761 415 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 MYBPC2Q14324 1141 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 ZNF174Q15697 407 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 ME3Q16798 604 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 TMEM150AQ86TG1 271 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 OR10T2Q8NGX3 314 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 RUSC1Q9BVN2 902 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 SCNM1Q9BWG6 230 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 DDX19AQ9NUU7 478 aaKnown RBP18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 ANKFY1Q9P2R3 1169 aa18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 ASCC3Q8N3C0 2202 aaKnown RBP18.7■□□□□ 0.58
UBE2D4-209ENST00000454428 TTC26A0AVF1 554 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 TMEM8BA6NDV4 472 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 SLC16A4O15374 487 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 TOM1L1O75674 476 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 ARSAP15289 507 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 TYMPP19971 482 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 U2AF2P26368 475 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 DMP1Q13316 513 aaPredicted RBP18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 NOLC1Q14978 699 aaKnown RBP eCLIP18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 HAUS3Q68CZ6 603 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 OVOS1Q6IE37 1185 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 CMTM8Q8IZV2 173 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 C4orf32Q8N8J7 132 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 GTF3C6Q969F1 213 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 THG1LQ9NWX6 298 aaKnown RBP18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 HSFX1Q9UBD0 423 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 EBF1Q9UH73 591 aa18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 ZNF638Q14966 1978 aaKnown RBP18.69■□□□□ 0.58
UBE2D4-209ENST00000454428 SFI1A8K8P3 1242 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 E9PMD0 336 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 CEACAM1P13688 526 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 CSRP1P21291 193 aaKnown RBP18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 GALK1P51570 392 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 RING1Q06587 406 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 MCL1Q07820 350 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 PTPAQ15257 358 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 ELF2Q15723 593 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 LRSAM1Q6UWE0 723 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 SYT13Q7L8C5 426 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 USP37Q86T82 979 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms