RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SMG8Q8ND04 991 aaKnown RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 VN1R2Q8NFZ6 395 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 TAF4BQ92750 862 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 NKD2Q969F2 451 aaPredicted RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 JAKMIP2Q96AA8 810 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 ZNF689Q96CS4 500 aaPredicted RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 FAM212AQ96EL1 285 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 ZNF830Q96NB3 372 aaPredicted RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 PLVAPQ9BX97 442 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 FTHL17Q9BXU8 183 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 MTMR12Q9C0I1 747 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 SMOC2Q9H3U7 446 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 NXF3Q9H4D5 531 aaKnown RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 TLE6Q9H808 572 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 NLRC4Q9NPP4 1024 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 SNTG2Q9NY99 539 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 DNAJC12Q9UKB3 198 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 ITGA11Q9UKX5 1188 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 BZW2Q9Y6E2 419 aaKnown RBP12.59□□□□□ -0.39
AC009404.1-202ENST00000439955 F8VZ95 297 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 KRT37O76014 449 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 VNN1O95497 513 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 ASS1P00966 412 aaKnown RBP12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 NFICP08651 508 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 CCDC172P0C7W6 258 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 KCNE1P15382 129 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 FERP16591 822 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 TBXAS1P24557 533 aaPredicted RBP12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 ANXA13P27216 316 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 ATICP31939 592 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 PRKCIP41743 596 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 STAT1P42224 750 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 MFAP3P55082 362 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 APBA1Q02410 837 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 NCOA4Q13772 614 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 SGSM1Q2NKQ1 1148 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 WDR59Q6PJI9 974 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 MRPL10Q7Z7H8 261 aaKnown RBP12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 KREMEN2Q8NCW0 462 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 KIAA1524Q8TCG1 905 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 HELQQ8TDG4 1101 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 MICAL1Q8TDZ2 1067 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 VRTNQ9H8Y1 702 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 KCND1Q9NSA2 647 aa12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
AC009404.1-202ENST00000439955 A0A0U1RQF3 1178 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 SSU72P8A0A1W2PR75 194 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 STAU1O95793 577 aaKnown RBP12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 SOX5P35711 763 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 GATMP50440 423 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 NOP14P78316 857 aaKnown RBP12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 TRPC3Q13507 836 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 RAPGEF1Q13905 1077 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 ASIC2Q16515 512 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 ARHGEF19Q8IW93 802 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 PPM1KQ8N3J5 372 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 SHC3Q92529 594 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 SUSD6Q92537 303 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 FAM124BQ9H5Z6 455 aaPredicted RBP12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 UBE2TQ9NPD8 197 aaPredicted RBP12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 UBN1Q9NPG3 1134 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 CDH22Q9UJ99 828 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 AJAP1Q9UKB5 411 aaPredicted RBP12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 PYCARDQ9ULZ3 195 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 UBQLN1Q9UMX0 589 aaKnown RBP12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 GIT1Q9Y2X7 761 aa12.57□□□□□ -0.4
AC009404.1-202ENST00000439955 CACNA1HO95180 2353 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 ESPNB1AK53 854 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 CCP110O43303 1012 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 SERPING1P05155 500 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 ITGA4P13612 1032 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 CYP3A5P20815 502 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 CYLC1P35663 651 aaPredicted RBP12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 DRAP1Q14919 205 aaPredicted RBP12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 E4F1Q66K89 784 aaPredicted RBP12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 GJB7Q6PEY0 223 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 C1orf127Q8N9H9 656 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 BEST2Q8NFU1 509 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 LINC01599Q8WXQ3 324 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 PGBD4Q96DM1 585 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 ADAM2Q99965 735 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 GPR88Q9GZN0 384 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 NIF3L1Q9GZT8 377 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 XYLT2Q9H1B5 865 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 RGS18Q9NS28 235 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 SIX4Q9UIU6 781 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 HES2Q9Y543 173 aa12.56□□□□□ -0.4
AC009404.1-202ENST00000439955 PTPRZ1P23471 2315 aaPredicted RBP12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 SMIM28A0A1B0GU29 152 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 SOWAHDA6NJG2 315 aa12.55□□□□□ -0.4
AC009404.1-202ENST00000439955 TULP1O00294 542 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms