RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ASPAP45381 313 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 MAGOHP61326 146 aaKnown RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 PIGHQ14442 188 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 CCNG2Q16589 344 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 PTGISQ16647 500 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF792Q3KQV3 632 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 LDLRAD1Q5T700 205 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 DAB2IPQ5VWQ8 1189 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 SCARA3Q6AZY7 606 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF365Q70YC5 407 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 TRMT10CQ7L0Y3 403 aaKnown RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 SRLQ86TD4 932 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 ATG4AQ8WYN0 398 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 RNF25Q96BH1 459 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 MCEEQ96PE7 176 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 PPP1R16BQ96T49 567 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 FDXACB1Q9BRP7 624 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 HEMGNQ9BXL5 484 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 TSPYL1Q9H0U9 437 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 STMN4Q9H169 189 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 EPN3Q9H201 632 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 RNPEPQ9H4A4 650 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 CNOT10Q9H9A5 744 aaKnown RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 DDX56Q9NY93 547 aaKnown RBP11.05□□□□□ -0.64
CPNE1-218ENST00000439806 CLEC11AQ9Y240 323 aa11.05□□□□□ -0.64
CPNE1-218ENST00000439806 RBM47A0AV96 593 aaKnown RBP11.04□□□□□ -0.64
CPNE1-218ENST00000439806 TLDC2A0PJX2 215 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 IQCA1LA6NCM1 817 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 SMIM23A6NLE4 172 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 GPR25O00155 361 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 SHBGP04278 402 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 PAEPP09466 180 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 P4HA1P13674 534 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 EIF4BP23588 611 aaKnown RBP11.04□□□□□ -0.64
CPNE1-218ENST00000439806 ATICP31939 592 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 ADCY8P40145 1251 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 RAP1GAPP47736 663 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 GCLCP48506 637 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-218ENST00000439806 LMNB2Q03252 620 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 SLC29A2Q14542 456 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 GJC2Q5T442 439 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-218ENST00000439806 C6orf118Q5T5N4 469 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 CYP4A22Q5TCH4 519 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 LRRC38Q5VT99 294 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 TAPT1Q6NXT6 567 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 DENND1BQ6P3S1 775 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 CEP128Q6ZU80 1094 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 B4GALNT4Q76KP1 1039 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 GSTA5Q7RTV2 222 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
CPNE1-218ENST00000439806 C3orf20Q8ND61 904 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 PPTC7Q8NI37 304 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 AFG1LQ8WV93 481 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 TFAP2BQ92481 460 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 TLCD1Q96CP7 247 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 FAXDC2Q96IV6 333 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 SLITRK1Q96PX8 696 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 ADPGKQ9BRR6 497 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 HERPUD2Q9BSE4 406 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 SYT17Q9BSW7 474 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 BCO2Q9BYV7 579 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 XYLT2Q9H1B5 865 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 EPB41L4BQ9H329 900 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 PDZD7Q9H5P4 517 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 ASB7Q9H672 318 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 MINDY3Q9H8M7 445 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 KLHL11Q9NVR0 708 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 ANAPC5Q9UJX4 755 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 R3HDM2Q9Y2K5 976 aaKnown RBP11.04□□□□□ -0.64
CPNE1-218ENST00000439806 SLC45A1Q9Y2W3 748 aa11.04□□□□□ -0.64
CPNE1-218ENST00000439806 CCL15-CCL14A0A0B4J2E2 113 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 TCRBV5S1A1TA0A578 114 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 E7EVH7 732 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 PI4K2BG5E9Z4 385 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 GOLGA8SH3BPF8 625 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 O00370 1275 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 RIPK2O43353 540 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 STRNO43815 780 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 CAND2O75155 1236 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 TJP3O95049 919 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 VTNP04004 478 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 ITGB3P05106 788 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 ZNF286BP0CG31 522 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-218ENST00000439806 PSMA2P25787 234 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 ADCYAP1R1P41586 468 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 VPS41P49754 854 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 GTF2A2P52657 109 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 ITGA8P53708 1063 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 COPS2P61201 443 aa11.03□□□□□ -0.64
CPNE1-218ENST00000439806 RPL7AP62424 266 aaKnown RBP11.03□□□□□ -0.64
CPNE1-218ENST00000439806 NFX1Q12986 1120 aaKnown RBP11.03□□□□□ -0.64
CPNE1-218ENST00000439806 KLF1Q13351 362 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms