RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SGTAO43765 313 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 EDNRBP24530 442 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 PTH2RP49190 550 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 EVA1CP58658 441 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 ZNF280AP59817 542 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 ZNF169Q14929 603 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 ZNF772Q68DY9 489 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 Q8NA96 180 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 PRPF38AQ8NAV1 312 aaKnown RBP6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 CAGE1Q8TC20 777 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 COA7Q96BR5 231 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 CLPTM1LQ96KA5 538 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 PRDM13Q9H4Q3 707 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 DMTF1Q9Y222 760 aa6.4□□□□□ -1.38
HMGB3P5-201ENST00000428894 FZD9O00144 591 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 TSPY4P0CV99 314 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 TSPY10P0CW01 314 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 PPP4R3AQ6IN85 833 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 FBXO42Q6P3S6 717 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 GADL1Q6ZQY3 521 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 RD3Q7Z3Z2 195 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 PNMA8AQ86V59 439 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 IL17RDQ8NFM7 739 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 KAT5Q92993 513 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 MRGPRX4Q96LA9 322 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 TLR10Q9BXR5 811 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 ALG13Q9NP73 1137 aaKnown RBP6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 KCTD5Q9NXV2 234 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 LRIT1Q9P2V4 623 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 TLK1Q9UKI8 766 aa6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P5-201ENST00000428894 SRCAPQ6ZRS2 3230 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 MRPS35P82673 323 aaKnown RBP6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 RAB39AQ14964 217 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 LNX2Q8N448 690 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 ZNF764Q96H86 408 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 DUSP26Q9BV47 211 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 PACSIN1Q9BY11 444 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 R3HDMLQ9H3Y0 253 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 RSAD1Q9HA92 442 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 KIAA1586Q9HCI6 787 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 CDYLQ9Y232 598 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 PCDHB1Q9Y5F3 818 aa6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 CFAP65Q6ZU64 1925 aaKnown RBP6.38□□□□□ -1.39
HMGB3P5-201ENST00000428894 PCSK5Q92824 1860 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 SCAF11Q99590 1463 aaKnown RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 FYCO1Q9BQS8 1478 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 JCADQ9P266 1359 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 SPATA31A6Q5VVP1 1343 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 ALG1L2C9J202 215 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 SLC43A1O75387 559 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 CD1AP06126 327 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 FBLP22087 321 aaKnown RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 RARRES1P49788 294 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 KRT85P78386 507 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 SIM1P81133 766 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 SF3B3Q15393 1217 aaKnown RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 MEX3CQ5U5Q3 659 aaKnown RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 SP5Q6BEB4 398 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 SSH3Q8TE77 659 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 NTN5Q8WTR8 489 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 VSX1Q9NZR4 365 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 JKAMPQ9P055 326 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 FOXJ2Q9P0K8 574 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 CALCOCO1Q9P1Z2 691 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 COX11Q9Y6N1 276 aa6.37□□□□□ -1.39
HMGB3P5-201ENST00000428894 XIRP1Q702N8 1843 aaKnown RBP6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 ZC3H13Q5T200 1668 aaKnown RBP6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 LRRC9Q6ZRR7 1453 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 MBD5Q9P267 1494 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 MTUS2Q5JR59 1369 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 TNKSO95271 1327 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 RPLP2P05387 115 aaKnown RBP6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 KCNA2P16389 499 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 TLE1Q04724 770 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 FPGSQ05932 587 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 ZNF844Q08AG5 666 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 ODF1Q14990 250 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 CCDC142Q17RM4 750 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 UAP1L1Q3KQV9 507 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 FLYWCH1Q4VC44 716 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 CLNKQ7Z7G1 428 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 ACTRT2Q8TDY3 377 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 TMEM125Q96AQ2 219 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 KLHL32Q96NJ5 620 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 DMRTA2Q96SC8 542 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 SERPINB13Q9UIV8 391 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 SLC45A2Q9UMX9 530 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 SETD1AO15047 1707 aaKnown RBP6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 ROBO1Q9Y6N7 1651 aa6.36□□□□□ -1.39
HMGB3P5-201ENST00000428894 MSH6P52701 1360 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 TMEM94Q12767 1356 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 ZNF644Q9H582 1327 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 PRAMEF33A0A0G2JMD5 474 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 A0A1W2PS29 197 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 MASP2O00187 686 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms