RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 RASSF3Q86WH2 238 aa18.43■□□□□ 0.54
PMS1-206ENST00000418224 RBM15Q96T37 977 aaKnown RBP eCLIP18.43■□□□□ 0.54
PMS1-206ENST00000418224 DDTLA6NHG4 134 aaPredicted RBP18.42■□□□□ 0.54
PMS1-206ENST00000418224 B2RBV5 119 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 K7ENM7 598 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
PMS1-206ENST00000418224 TXNDC9O14530 226 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 MAGEB3O15480 346 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 FUT4P22083 530 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 MAGEA4P43358 317 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 ARFIP2P53365 341 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 NR1H3Q13133 447 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 APOBEC3HQ6NTF7 200 aaKnown RBP18.42■□□□□ 0.54
PMS1-206ENST00000418224 PPP2R3CQ969Q6 453 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 HEMGNQ9BXL5 484 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 SAYSD1Q9NPB0 183 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 CYLDQ9NQC7 956 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 NYAP2Q9P242 653 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 A0A0J9YVX5 310 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 PABPC4LP0CB38 370 aaKnown RBP18.42■□□□□ 0.54
PMS1-206ENST00000418224 PLS3P13797 630 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 CIITAP33076 1130 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 ANKRD23Q86SG2 305 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 LRRC6Q86X45 466 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 SLC5A5Q92911 643 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 FIZ1Q96SL8 496 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 PCDHB18PQ96TA0 734 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 NUP85Q9BW27 656 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 COA1Q9GZY4 146 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 DMAC2Q9NW81 257 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 PKD2L1Q9P0L9 805 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 PPM1HQ9ULR3 514 aa18.42■□□□□ 0.54
PMS1-206ENST00000418224 H3BRJ5 948 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 GOLGA8RI6L899 631 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 GAS8O95995 478 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 GALK1P51570 392 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 FBXO27Q8NI29 283 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 ZNF564Q8TBZ8 553 aaPredicted RBP18.41■□□□□ 0.54
PMS1-206ENST00000418224 VPS37BQ9H9H4 285 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 TUFT1Q9NNX1 390 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 WRAP73Q9P2S5 460 aaPredicted RBP18.41■□□□□ 0.54
PMS1-206ENST00000418224 ARHGEF35A5YM69 484 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 PPP3CAQ08209 521 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 SLC15A2Q16348 729 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 IZUMO3Q5VZ72 239 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 RIPOR1Q6ZS17 1223 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 RAPH1Q70E73 1250 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 SIAH1Q8IUQ4 282 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 PPM1KQ8N3J5 372 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 ZNF653Q96CK0 615 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 KLF6Q99612 283 aaPredicted RBP18.41■□□□□ 0.54
PMS1-206ENST00000418224 EURLQ9NYK6 297 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 GMEB1Q9Y692 573 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 CCDC166P0CW27 439 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 KRT4P19013 534 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 HPCAP84074 193 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 CBX3Q13185 183 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 RGS9BPQ6ZS82 235 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 MAP7D3Q8IWC1 876 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 RNF168Q8IYW5 571 aaPredicted RBP18.41■□□□□ 0.54
PMS1-206ENST00000418224 LMO3Q8TAP4 145 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 TRIM55Q9BYV6 548 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 IL1RAPL1Q9NZN1 696 aa18.41■□□□□ 0.54
PMS1-206ENST00000418224 IGLV3-22A0A075B6J6 115 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 CYP26A1O43174 497 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 GCAP28676 217 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 CEP70Q8NHQ1 597 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 MKL1Q969V6 931 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 THTPAQ9BU02 230 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 SEL1LQ9UBV2 794 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 PRPF4O43172 522 aaKnown RBP eCLIP18.4■□□□□ 0.542e-7■■■□□ 15.6
PMS1-206ENST00000418224 ZNF862O60290 1169 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 ENO1P06733 434 aaKnown RBP18.4■□□□□ 0.54
PMS1-206ENST00000418224 BMP3P12645 472 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 VAMP7P51809 220 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 ADARP55265 1226 aaKnown RBP18.4■□□□□ 0.54
PMS1-206ENST00000418224 MED21Q13503 144 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 DUS1LQ6P1R4 473 aaKnown RBP18.4■□□□□ 0.54
PMS1-206ENST00000418224 NOP9Q86U38 636 aaKnown RBP18.4■□□□□ 0.54
PMS1-206ENST00000418224 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 NACC1Q96RE7 527 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 TMEM120AQ9BXJ8 343 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 MAK16Q9BXY0 300 aaKnown RBP18.4■□□□□ 0.54
PMS1-206ENST00000418224 RMI1Q9H9A7 625 aa18.4■□□□□ 0.54
PMS1-206ENST00000418224 SMG5Q9UPR3 1016 aaKnown RBP18.4■□□□□ 0.54
PMS1-206ENST00000418224 R3HDM2Q9Y2K5 976 aaKnown RBP18.4■□□□□ 0.54
PMS1-206ENST00000418224 PPEF1O14829 653 aaPredicted RBP18.39■□□□□ 0.54
PMS1-206ENST00000418224 CIB2O75838 187 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 PRELPP51888 382 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 AP2B1P63010 937 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 NFIL3Q16649 462 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 ARHGAP24Q8N264 748 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.39■□□□□ 0.54
PMS1-206ENST00000418224 ELMO3Q96BJ8 720 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 C8orf37Q96NL8 207 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 PHF12Q96QT6 1004 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 CBWD1Q9BRT8 395 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 HERPUD2Q9BSE4 406 aa18.39■□□□□ 0.54
PMS1-206ENST00000418224 TUBB6Q9BUF5 446 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms