RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 CLEC16AQ2KHT3 1053 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 MACC1Q6ZN28 852 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 RNF44Q7L0R7 432 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 CYB5R4Q7L1T6 521 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 PQBP1O60828 265 aaKnown RBP19.29■□□□□ 0.68
SHANK3-202ENST00000414786 CLASP2O75122 1294 aaKnown RBP19.29■□□□□ 0.68
SHANK3-202ENST00000414786 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 LDHDQ86WU2 507 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 TMEM169Q96HH4 297 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 CHMP2BQ9UQN3 213 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 QRICH1Q2TAL8 776 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 CLYBLQ8N0X4 340 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 GGA3Q9NZ52 723 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 EDC4Q6P2E9 1401 aaKnown RBP19.29■□□□□ 0.68
SHANK3-202ENST00000414786 SRP72O76094 671 aaKnown RBP19.28■□□□□ 0.68
SHANK3-202ENST00000414786 STAU1O95793 577 aaKnown RBP19.28■□□□□ 0.68
SHANK3-202ENST00000414786 EGFRP00533 1210 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CHGBP05060 677 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CKBP12277 381 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CPA2P48052 419 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 SNAPC2Q13487 334 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 R3HCC1LQ7Z5L2 792 aaKnown RBP19.28■□□□□ 0.68
SHANK3-202ENST00000414786 BTBD9Q96Q07 612 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 MRPL1Q9BYD6 325 aaKnown RBP19.28■□□□□ 0.68
SHANK3-202ENST00000414786 NOP53Q9NZM5 478 aaKnown RBP19.28■□□□□ 0.68
SHANK3-202ENST00000414786 AKR1B1P15121 316 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 HIC1Q14526 733 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 TMEM132BQ14DG7 1078 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CCT7Q99832 543 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 TM6SF1Q9BZW5 370 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CD209Q9NNX6 404 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 MRPL39Q9NYK5 338 aaKnown RBP19.28■□□□□ 0.68
SHANK3-202ENST00000414786 COQ6Q9Y2Z9 468 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 SCP2P22307 547 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 NUP62P37198 522 aaPredicted RBP19.28■□□□□ 0.68
SHANK3-202ENST00000414786 SCNN1BP51168 640 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 SPACA6W5XKT8 324 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CUL4AQ13619 759 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 UNC45BQ8IWX7 931 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CERKQ8TCT0 537 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 TCP11X1B4DZS4 312 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 CNTN1Q12860 1018 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 NR1H3Q13133 447 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 NSMCE4AQ9NXX6 385 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 RHOT1Q8IXI2 618 aa19.28■□□□□ 0.68
SHANK3-202ENST00000414786 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.27■□□□□ 0.68
SHANK3-202ENST00000414786 LRRC14BA6NHZ5 514 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 HLA-DQA2P01906 255 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 ZNF177Q13360 481 aaPredicted RBP19.27■□□□□ 0.68
SHANK3-202ENST00000414786 LRRC8BQ6P9F7 803 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 CCDC103Q8IW40 242 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 CELF1Q92879 486 aaKnown RBP19.27■□□□□ 0.68
SHANK3-202ENST00000414786 C18orf8Q96DM3 657 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 CAAP1Q9H8G2 361 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 METTL5Q9NRN9 209 aaKnown RBP19.27■□□□□ 0.68
SHANK3-202ENST00000414786 BSDC1Q9NW68 430 aaPredicted RBP19.27■□□□□ 0.68
SHANK3-202ENST00000414786 PRKAB1Q9Y478 270 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 FOSL2P15408 326 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 ABCE1P61221 599 aaKnown RBP19.27■□□□□ 0.68
SHANK3-202ENST00000414786 SRSF11Q05519 484 aaKnown RBP19.27■□□□□ 0.68
SHANK3-202ENST00000414786 BFSP2Q13515 415 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 UNC13DQ70J99 1090 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 CYP4F12Q9HCS2 524 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 IMPAD1Q9NX62 359 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 GNG14A0A1W2PPG7 69 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 RGS4P49798 205 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 NT5DC3Q86UY8 548 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 MMGT1Q8N4V1 131 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 CPB2Q96IY4 423 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 TUFT1Q9NNX1 390 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 CYP2C9P11712 490 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 NBPF9Q3BBW0 867 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 USP6NLQ92738 828 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 KATNAL1Q9BW62 490 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 CDYLQ9Y232 598 aa19.27■□□□□ 0.68
SHANK3-202ENST00000414786 UMPSP11172 480 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 EIF3BP55884 814 aaKnown RBP19.27■□□□□ 0.67
SHANK3-202ENST00000414786 TAF13Q15543 124 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 EME1Q96AY2 570 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 ECSITQ9BQ95 431 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 KRT33AO76009 404 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 DLGAP3O95886 979 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 SENP7Q9BQF6 1050 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 GID8Q9NWU2 228 aa19.27■□□□□ 0.67
SHANK3-202ENST00000414786 LOC100653049A0A140TA62 436 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 CFAP99D6REC4 459 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 KRT34O76011 436 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 NOS3P29474 1203 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 P3H2Q8IVL5 708 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 CEP72Q9P209 647 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 RNF112Q9ULX5 631 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 SERPINB10P48595 397 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 TMC2Q8TDI7 906 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 VAC14Q08AM6 782 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 POLD3Q15054 466 aaPredicted RBP19.26■□□□□ 0.67
SHANK3-202ENST00000414786 LLGL2Q6P1M3 1020 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 SSH3Q8TE77 659 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.26■□□□□ 0.67
SHANK3-202ENST00000414786 UBE2Q2LH0YL09 131 aa19.26■□□□□ 0.67
SHANK3-202ENST00000414786 PSMA3P25788 255 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms