RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 PPFIA2O75334 1257 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 IVLP07476 585 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 CDH5P33151 784 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-202ENST00000414675 GJC1P36383 396 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 FNTAP49354 379 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 RAD23BP54727 409 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 DNAJC21Q5F1R6 531 aaKnown RBP16.31■□□□□ 0.2
LRCH3-202ENST00000414675 CYP4A22Q5TCH4 519 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 LENG1Q96BZ8 264 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-202ENST00000414675 SCLT1Q96NL6 688 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 HEMGNQ9BXL5 484 aa16.31■□□□□ 0.2
LRCH3-202ENST00000414675 PSTPIP1O43586 416 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 RALAP11233 206 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 CD19P15391 556 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 ZNF844Q08AG5 666 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 TMEM62Q0P6H9 643 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 DGKDQ16760 1214 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 ATP13A4Q4VNC1 1196 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 SGO2Q562F6 1265 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 IQSEC1Q6DN90 963 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 LRIG3Q6UXM1 1119 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-202ENST00000414675 MCEEQ96PE7 176 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 EPB41L4BQ9H329 900 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 KLHL11Q9NVR0 708 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 ATP8A1Q9Y2Q0 1164 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 CALB1P05937 261 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-202ENST00000414675 KIZQ2M2Z5 673 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 CST9Q5W186 159 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 PLVAPQ9BX97 442 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 ELOVL4Q9GZR5 314 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 FLRT1Q9NZU1 646 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
LRCH3-202ENST00000414675 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
LRCH3-202ENST00000414675 A0A1B0GUA9 196 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 PODXLO00592 558 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 DYNC1LI2O43237 492 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 POLR2BP30876 1174 aaKnown RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 MAN1A1P33908 653 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 SSR1P43307 286 aaKnown RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 KLF1Q13351 362 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 TRIP12Q14669 1992 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 PTPN20Q4JDL3 420 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 UBAP2Q5T6F2 1119 aaKnown RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 CCDC50Q8IVM0 306 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 KATNAL2Q8IYT4 538 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 SLC4A11Q8NBS3 891 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 FAM49AQ9H0Q0 323 aaPredicted RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 ASB7Q9H672 318 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 CDHR5Q9HBB8 845 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 TMBIM4Q9HC24 238 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 IP6K2Q9UHH9 426 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 SCN1AP35498 2009 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 F8VP50 259 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 ERLIN2O94905 339 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 EIF4BP23588 611 aaKnown RBP16.29■□□□□ 0.2
LRCH3-202ENST00000414675 TMEM132DQ14C87 1099 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 ERICH1Q86X53 443 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 FAM118BQ9BPY3 351 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 DCLK3Q9C098 648 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 ZNF518BQ9C0D4 1074 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 ADAMTS10Q9H324 1103 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 GINS2Q9Y248 185 aa16.29■□□□□ 0.2
LRCH3-202ENST00000414675 IGF2BP3O00425 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
LRCH3-202ENST00000414675 SHOX2O60902 331 aaPredicted RBP16.28■□□□□ 0.2
LRCH3-202ENST00000414675 ECEL1O95672 775 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
LRCH3-202ENST00000414675 MTMR3Q13615 1198 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 HIC1Q14526 733 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 TXNRD3NBQ6F5E7 133 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 KAT2BQ92831 832 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 RNF25Q96BH1 459 aaPredicted RBP16.28■□□□□ 0.2
LRCH3-202ENST00000414675 ATP6V1G3Q96LB4 118 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 AGAP1Q9UPQ3 857 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 PI4K2BG5E9Z4 385 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 TP73O15350 636 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 CILPO75339 1184 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 RPS6KA5O75582 802 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 KRT17Q04695 432 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 ADCY2Q08462 1091 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 MORN1Q5T089 497 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 TTC19Q6DKK2 380 aaPredicted RBP16.28■□□□□ 0.2
LRCH3-202ENST00000414675 LRRC31Q6UY01 552 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 SLCO2A1Q92959 643 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 HPDLQ96IR7 371 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 RUNDC3BQ96NL0 473 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 OSBPL8Q9BZF1 889 aa16.28■□□□□ 0.2
LRCH3-202ENST00000414675 GNEQ9Y223 722 aaKnown RBP16.28■□□□□ 0.2
LRCH3-202ENST00000414675 PASKQ96RG2 1323 aa16.27■□□□□ 0.2
LRCH3-202ENST00000414675 A6NJR5 290 aa16.27■□□□□ 0.2
LRCH3-202ENST00000414675 SMIM10L2AP0DMW4 78 aa16.27■□□□□ 0.2
LRCH3-202ENST00000414675 SMIM10L2BP0DMW5 78 aa16.27■□□□□ 0.2
LRCH3-202ENST00000414675 HOXA11P31270 313 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms