RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 WDR44Q5JSH3 913 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 TPGS2Q68CL5 300 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 LILRA6Q6PI73 481 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 ELMSAN1Q6PJG2 1045 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 ADGRF2Q8IZF7 708 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 TTC39CQ8N584 583 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 AOPEPQ8N6M6 819 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 SLC22A17Q8WUG5 538 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 SEMA4DQ92854 862 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 ACBD6Q9BR61 282 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 BCO2Q9BYV7 579 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 HSD3B7Q9H2F3 369 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 TIMM13Q9Y5L4 95 aaPredicted RBP19.44■□□□□ 0.7
PAX3-208ENST00000409828 CDY1Q9Y6F8 540 aa19.44■□□□□ 0.7
PAX3-208ENST00000409828 BECN2A8MW95 431 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 ABLIM3O94929 683 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 GLUD1P00367 558 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 PCSK1P29120 753 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 OR1D2P34982 312 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 CA8P35219 290 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 VWA3BQ502W6 1294 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 CREBRFQ8IUR6 639 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 MAFAQ8NHW3 353 aaPredicted RBP19.43■□□□□ 0.7
PAX3-208ENST00000409828 ZNF461Q8TAF7 563 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 LMO3Q8TAP4 145 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 FAM200AQ8TCP9 573 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 KBTBD7Q8WVZ9 684 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 CASP10Q92851 521 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 MMS19Q96T76 1030 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 NIF3L1Q9GZT8 377 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 NDST4Q9H3R1 872 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 PLEKHA4Q9H4M7 779 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 NXF1Q9UBU9 619 aaKnown RBP19.43■□□□□ 0.7
PAX3-208ENST00000409828 LIMA1Q9UHB6 759 aaKnown RBP19.43■□□□□ 0.7
PAX3-208ENST00000409828 HCFC2Q9Y5Z7 792 aa19.43■□□□□ 0.7
PAX3-208ENST00000409828 PER2O15055 1255 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 PAPLNO95428 1278 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 TPM2P07951 284 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 ASPAP45381 313 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 ROR1Q01973 937 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 GPR17Q13304 367 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 MIIPQ5JXC2 388 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 RSPO2Q6UXX9 243 aaPredicted RBP19.42■□□□□ 0.7
PAX3-208ENST00000409828 RBM23Q86U06 439 aaKnown RBP19.42■□□□□ 0.7
PAX3-208ENST00000409828 EHBP1Q8NDI1 1231 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 FAM81BQ96LP2 452 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 RTP3Q9BQQ7 232 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 ZCWPW1Q9H0M4 648 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 APOBEC3GQ9HC16 384 aaKnown RBP19.42■□□□□ 0.7
PAX3-208ENST00000409828 DZANK1Q9NVP4 752 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 DDX43Q9NXZ2 648 aaKnown RBP19.42■□□□□ 0.7
PAX3-208ENST00000409828 HSFX1Q9UBD0 423 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 COG5Q9UP83 839 aa19.42■□□□□ 0.7
PAX3-208ENST00000409828 REV3LO60673 3130 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.41■□□□□ 0.7
PAX3-208ENST00000409828 CSPG5O95196 566 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 HOXB8P17481 243 aaPredicted RBP19.41■□□□□ 0.7
PAX3-208ENST00000409828 RPL17P18621 184 aaKnown RBP19.41■□□□□ 0.7
PAX3-208ENST00000409828 TBXAS1P24557 533 aaPredicted RBP19.41■□□□□ 0.7
PAX3-208ENST00000409828 INCA1Q0VD86 236 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 KRT31Q15323 416 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 UVSSAQ2YD98 709 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 UNC93AQ86WB7 457 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 MICALL1Q8N3F8 863 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 C2orf15Q8WU43 125 aaKnown RBP19.41■□□□□ 0.7
PAX3-208ENST00000409828 PI4K2AQ9BTU6 479 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 CBX8Q9HC52 389 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 AFF4Q9UHB7 1163 aaKnown RBP19.41■□□□□ 0.7
PAX3-208ENST00000409828 FBXW11Q9UKB1 542 aa19.41■□□□□ 0.7
PAX3-208ENST00000409828 ADAM12O43184 909 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 TGM5O43548 720 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 ATF2P15336 505 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 CDK11BP21127 795 aaKnown RBP19.4■□□□□ 0.7
PAX3-208ENST00000409828 GNL1P36915 607 aaPredicted RBP19.4■□□□□ 0.7
PAX3-208ENST00000409828 TPM4P67936 248 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 TSPY1Q01534 308 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 NFE2Q16621 373 aaPredicted RBP19.4■□□□□ 0.7
PAX3-208ENST00000409828 SPOPLQ6IQ16 392 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 GBP6Q6ZN66 633 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 DCP1BQ8IZD4 617 aaKnown RBP19.4■□□□□ 0.7
PAX3-208ENST00000409828 OR10T2Q8NGX3 314 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 JAKMIP2Q96AA8 810 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 NT5C1BQ96P26 610 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 ANP32EQ9BTT0 268 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 RHOBTB2Q9BYZ6 727 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 TSPY26PQ9H489 355 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 CDH9Q9ULB4 789 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 POLIQ9UNA4 740 aa19.4■□□□□ 0.7
PAX3-208ENST00000409828 WDR27A2RRH5 827 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 LRRN2O75325 713 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 GLP2RO95838 553 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 GTF2F1P35269 517 aaKnown RBP eCLIP19.39■□□□□ 0.69
PAX3-208ENST00000409828 GCNT1Q02742 428 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 MAPRE1Q15691 268 aaKnown RBP19.39■□□□□ 0.69
PAX3-208ENST00000409828 EXOC3L4Q17RC7 722 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 HSP90AA4PQ58FG1 418 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 INTS6LQ5JSJ4 861 aaKnown RBP19.39■□□□□ 0.69
PAX3-208ENST00000409828 OSTM1Q86WC4 334 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 TCEAL8Q8IYN2 117 aa19.39■□□□□ 0.69
PAX3-208ENST00000409828 VN1R2Q8NFZ6 395 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms