RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 OTOFQ9HC10 1997 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 LIASO43766 372 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 TJP3O95049 919 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 TNNC2P02585 160 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 PGK2P07205 417 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 WEE2P0C1S8 567 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 TCF4P15884 667 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 PROZP22891 400 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 EIF4BP23588 611 aaKnown RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 YWHAEP62258 255 aaKnown RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 TFDP1Q14186 410 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 CNGA2Q16280 664 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 ATP13A4Q4VNC1 1196 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 KAZNQ674X7 775 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 SMYD5Q6GMV2 418 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 THNSL1Q8IYQ7 743 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 CCHCR1Q8TD31 782 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 KAT2BQ92831 832 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 OTUD5Q96G74 571 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 ANKRD36BP1Q96IX9 119 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 FGD4Q96M96 766 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 PWWP2AQ96N64 755 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 PRMT1Q99873 361 aaKnown RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 R3HDMLQ9H3Y0 253 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 ADM5C9JUS6 153 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 KRT10P13645 584 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 ATF7P17544 494 aaPredicted RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 ASPAP45381 313 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 IREB2P48200 963 aaKnown RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 COPS2P61201 443 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 OGDHQ02218 1023 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 PIGHQ14442 188 aaPredicted RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 TMEM132AQ24JP5 1023 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 ATF7IP2Q5U623 682 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 DRICH1Q6PGQ1 229 aaPredicted RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 SPOCD1Q6ZMY3 1216 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 ERICH1Q86X53 443 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 RELL1Q8IUW5 271 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 TFAP2BQ92481 460 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 ARHGEF2Q92974 986 aaKnown RBP17.81■□□□□ 0.44
NUP50-203ENST00000407019 SPATA33Q96N06 139 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 PTPRHQ9HD43 1115 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 IVNS1ABPQ9Y6Y0 642 aa17.81■□□□□ 0.44
NUP50-203ENST00000407019 GOLGA6L7A0A1B0GV03 622 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 F8VP50 259 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 H0YHG0 523 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 ACKR2O00590 384 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 B4GALT4O60513 344 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 TCEA3O75764 348 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 ACTN3Q08043 901 aaPredicted RBP17.8■□□□□ 0.44
NUP50-203ENST00000407019 HIBCHQ6NVY1 386 aaPredicted RBP17.8■□□□□ 0.44
NUP50-203ENST00000407019 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 SULF1Q8IWU6 871 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 DHX37Q8IY37 1157 aaKnown RBP17.8■□□□□ 0.44
NUP50-203ENST00000407019 WDTC1Q8N5D0 677 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 DCPSQ96C86 337 aaKnown RBP17.8■□□□□ 0.44
NUP50-203ENST00000407019 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 FOXP3Q9BZS1 431 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 FZD8Q9H461 694 aa17.8■□□□□ 0.44
NUP50-203ENST00000407019 ACTR5Q9H9F9 607 aaPredicted RBP17.8■□□□□ 0.44
NUP50-203ENST00000407019 DDX56Q9NY93 547 aaKnown RBP17.8■□□□□ 0.44
NUP50-203ENST00000407019 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 INO80B-WBP1J3KQ70 363 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 ASAP2O43150 1006 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 PTPN7P35236 360 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 P3H1Q32P28 736 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 EAPPQ56P03 285 aaPredicted RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 CNPY4Q8N129 248 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 NIPA2Q8N8Q9 360 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 CCDC197Q8NCU1 140 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 TRAPPC12Q8WVT3 735 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 INO80BQ9C086 356 aaPredicted RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 DNPEPQ9ULA0 475 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 B4GALT5O43286 388 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 SLC26A2P50443 739 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 OSTNP61366 133 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 LACTBP83111 547 aaPredicted RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 CYP4A22Q5TCH4 519 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 PRUNE1Q86TP1 453 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 LRRC34Q8IZ02 419 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 ZCCHC9Q8N567 271 aaKnown RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 P3H4Q92791 437 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 ZNF668Q96K58 619 aaPredicted RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 MMP19Q99542 508 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 NSRP1Q9H0G5 558 aaKnown RBP17.79■□□□□ 0.44
NUP50-203ENST00000407019 SMARCAD1Q9H4L7 1026 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 STRIP2Q9ULQ0 834 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 ZNF148Q9UQR1 794 aa17.79■□□□□ 0.44
NUP50-203ENST00000407019 hCG_1818297A0A087WSY0 165 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 GJB1P08034 283 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 IFNAR2P48551 515 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 KCTD2Q14681 263 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 R3HDM1Q15032 1099 aaKnown RBP17.78■□□□□ 0.44
NUP50-203ENST00000407019 EEF1DP3Q658K8 133 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 ERO1BQ86YB8 467 aa17.78■□□□□ 0.44
NUP50-203ENST00000407019 CEP120Q8N960 986 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms