RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 GOLGA8CPA6NN73 597 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ELNP15502 786 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 TTC1Q99614 292 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 TADA3O75528 432 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ACAT1P24752 427 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 EIF3BP55884 814 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 JAG1P78504 1218 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ZBED8Q8IZ13 594 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 COG1Q8WTW3 980 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ARHGEF2Q92974 986 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 GAD1Q99259 594 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 RBM12Q9NTZ6 932 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 RPLP2P05387 115 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 NNMTP40261 264 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 VSNL1P62760 191 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 CAPSQ13938 189 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ZNF410Q86VK4 478 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 PPM1NQ8N819 430 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 GMLQ99445 158 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 ASB7Q9H672 318 aa13.79□□□□□ -0.2
PTPRN2-202ENST00000389416 GMNNO75496 209 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 DLG4P78352 724 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 PPP3CAQ08209 521 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 MAPRE1Q15691 268 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 TPCN2Q8NHX9 752 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 C7orf43Q8WVR3 580 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ADAM2Q99965 735 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 LRRIQ3A6PVS8 624 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 RECQL4O94761 1208 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 APRTP07741 180 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ALDH1A3P47895 512 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ZNF235Q14590 738 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 EMC1Q8N766 993 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 IKZF4Q9H2S9 585 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 LMCD1Q9NZU5 365 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ATRNL1Q5VV63 1379 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 STK25O00506 426 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 MAFO75444 373 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 MAP3K6O95382 1288 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 RBP3P10745 1247 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 SESN2P58004 480 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 C10orf120Q5SQS8 335 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ANKRD23Q86SG2 305 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 MIB1Q86YT6 1006 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ATP6V1E2Q96A05 226 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 HDAC11Q96DB2 347 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 PABPC5Q96DU9 382 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 TMEM176AQ96HP8 235 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ZNF214Q9UL59 606 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 NEMP1O14524 444 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 PPP1R12AO14974 1030 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 IRF1P10914 325 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 PSMD6Q15008 389 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 CTXN3Q4LDR2 81 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 ARSHQ5FYA8 562 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 KCNT1Q5JUK3 1230 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 KAT5Q92993 513 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 BHMTQ93088 406 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 PLIN4Q96Q06 1357 aa13.78□□□□□ -0.2
PTPRN2-202ENST00000389416 M0QYT0 321 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 ATP9BO43861 1147 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 KRT37O76014 449 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 NR1D1P20393 614 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 DNAJB2P25686 324 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 GTF2BQ00403 316 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 DHX34Q14147 1143 aaKnown RBP13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 C6orf118Q5T5N4 469 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 PLPPR4Q7Z2D5 763 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 OR6P1Q8NGX9 317 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 SPATA18Q8TC71 538 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 ZNF606Q8WXB4 792 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 TTC25Q96NG3 672 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 RAB6BQ9NRW1 208 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 INTUQ9ULD6 942 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 KIAA1257Q9ULG3 409 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 TRPV2Q9Y5S1 764 aa13.77□□□□□ -0.2
PTPRN2-202ENST00000389416 ZBTB48P10074 688 aaPredicted RBP13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 NDST1P52848 882 aa13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 PMS2P54278 862 aa13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 CAV1Q03135 178 aa13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 ZSCAN26Q16670 478 aa13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 SNF8Q96H20 258 aa13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 VPS39Q96JC1 886 aa13.77□□□□□ -0.21
PTPRN2-202ENST00000389416 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■□□ 16.7
PTPRN2-202ENST00000389416 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms