RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 BANF1O75531 89 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ANP32DO95626 131 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 NCF1P14598 390 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 TCF7P36402 384 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 CASP7P55210 303 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ZNF200P98182 395 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 UBE3AQ05086 875 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TMEM132DQ14C87 1099 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 GOLGA7BQ2TAP0 167 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 C6orf10Q5SRN2 563 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CDKAL1Q5VV42 579 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 LLGL2Q6P1M3 1020 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TMEM154Q6P9G4 183 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ST13P4Q8IZP2 240 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 BBS5Q8N3I7 341 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 INPP5DQ92835 1189 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 AIPL1Q9NZN9 384 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SLC39A10Q9ULF5 831 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 DIS3Q9Y2L1 958 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 DEPDC5O75140 1603 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ADAMTS13Q76LX8 1427 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CCT8L1PA6NM43 557 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CDH16O75309 829 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SMARCA1P28370 1054 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ELF1P32519 619 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 USP10Q14694 798 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 CCDC85BQ15834 202 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 PNMA5Q96PV4 448 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SLC4A9Q96Q91 983 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TEX13BQ9BXU2 312 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CDC42EP4Q9H3Q1 356 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 DLGAP2Q9P1A6 1054 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 HERC5Q9UII4 1024 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 HACL1Q9UJ83 578 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 DIP2AQ14689 1571 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TYW5A2RUC4 315 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 PEX10O60683 326 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 DGAT1O75907 488 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CYP11B1P15538 503 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 FGFR2P21802 821 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SERPINB5P36952 375 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 NPTX2P47972 431 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 IMPG1Q17R60 797 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TKFCQ3LXA3 575 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CBWD6Q4V339 395 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CBWD3Q5JTY5 395 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CBWD5Q5RIA9 395 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 NBPF12Q5TAG4 269 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 ATF7IP2Q5U623 682 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 EXOC8Q8IYI6 725 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 MIER2Q8N344 545 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TTC13Q8NBP0 860 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 PRPF31Q8WWY3 499 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 PRCCQ92733 491 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 ELMO2Q96JJ3 720 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 UPF3AQ9H1J1 476 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 KIAA1586Q9HCI6 787 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 CYP26B1Q9NR63 512 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 PRG3Q9Y2Y8 225 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 SMNDC1O75940 238 aaKnown RBP eCLIP5.23□□□□□ -1.57
LTN1-202ENST00000389194 UBOX5O94941 541 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 PYGMP11217 842 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 MAPK7Q13164 816 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 STX3Q13277 289 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 EFTUD2Q15029 972 aaKnown RBP eCLIP5.23□□□□□ -1.574e-8■□□□□ 8.3
LTN1-202ENST00000389194 SURF1Q15526 300 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TRIP10Q15642 601 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 FAM131BQ86XD5 332 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 NKX2-3Q8TAU0 364 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 KRT35Q92764 455 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SERPINI1Q99574 410 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 MOV10L1Q9BXT6 1211 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 MYOZ2Q9NPC6 264 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.23□□□□□ -1.574e-8■■■■□ 26
LTN1-202ENST00000389194 HEY2Q9UBP5 337 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 SETBP1Q9Y6X0 1596 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 MEI4A8MW99 385 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ZNF286BP0CG31 522 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 NCAM1P13591 858 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 KCNA2P16389 499 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 RFX1P22670 979 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 MYL6P60660 151 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 FUT11Q495W5 492 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 XKR3Q5GH77 459 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 SPDYAQ5MJ70 313 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 BTBD8Q5XKL5 378 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 TTC8Q8TAM2 541 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 DIS3LQ8TF46 1054 aaKnown RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 ZNF669Q96BR6 464 aaPredicted RBP5.23□□□□□ -1.57
LTN1-202ENST00000389194 HPDLQ96IR7 371 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 EFHD1Q9BUP0 239 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 YY1AP1Q9H869 796 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ARMCX1Q9P291 453 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 NUDT5Q9UKK9 219 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 ZNRF3Q9ULT6 936 aa5.23□□□□□ -1.57
LTN1-202ENST00000389194 MROH2AA6NES4 1674 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 F8VZ95 297 aa5.22□□□□□ -1.57
LTN1-202ENST00000389194 ADCY3O60266 1144 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms