RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 MMP19Q99542 508 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 TDRD3Q9H7E2 651 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 HERC5Q9UII4 1024 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 SPDYE5A6NIY4 337 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 HIST1H2AGP0C0S8 130 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 HIST1H2ADP20671 130 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 MAPK7Q13164 816 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 SPDYE7PQ495Y7 208 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 SLC13A5Q86YT5 568 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 HIST1H2AHQ96KK5 128 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 HIST1H2AJQ99878 128 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 H2AFJQ9BTM1 129 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 APPL1Q9UKG1 709 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 SUPT3HB4E1H0 165 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 STRNO43815 780 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 USP1O94782 785 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 GPD1P21695 349 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 PAPD7Q5XG87 772 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 APPL2Q8NEU8 664 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 FEZF2Q8TBJ5 459 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 DCUN1D1Q96GG9 259 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 CNDP1Q96KN2 507 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 FARP1Q9Y4F1 1045 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 ADGRA3Q8IWK6 1321 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 ALBP02768 609 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 ZNF543Q08ER8 600 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 CCDC15Q0P6D6 951 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 SCARF1Q14162 830 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 WDR72Q3MJ13 1102 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 AARS2Q5JTZ9 985 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 SUGP1Q8IWZ8 645 aaKnown RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 SPATA18Q8TC71 538 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 GOLPH3Q9H4A6 298 aa17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 CAB39Q9Y376 341 aaPredicted RBP17.86■□□□□ 0.45
SNAPC3-202ENST00000380821 ACADSBP45954 432 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 ERVK-24P63145 666 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 SPDYAQ5MJ70 313 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 CENPPQ6IPU0 288 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 CELF1Q92879 486 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 FAM84BQ96KN1 310 aaPredicted RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 TJP2Q9UDY2 1190 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 NCOA3Q9Y6Q9 1424 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 CLK1P49759 484 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 STX5Q13190 355 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 DCAF4L1Q3SXM0 396 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 XKR3Q5GH77 459 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 C6orf10Q5SRN2 563 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 CAVIN3Q969G5 261 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 NSUN4Q96CB9 384 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 SH3GL2Q99962 352 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 TCN1P20061 433 aaPredicted RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 PSMA4P25789 261 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 CDC42EP1Q00587 391 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 DALRD3Q5D0E6 543 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 NLRP9Q7RTR0 991 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 FAR2Q96K12 515 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 AGAP3Q96P47 875 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 TMEM161AQ9NX61 479 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 DCDC2Q9UHG0 476 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 GLRA3O75311 464 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 PKN3Q6P5Z2 889 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 HIC2Q96JB3 615 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 SPATA17Q96L03 361 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 SPON2Q9BUD6 331 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 MOSPD1Q9UJG1 213 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 ITM2BQ9Y287 266 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 CLASP2O75122 1294 aaKnown RBP17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 FDFT1P37268 417 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 PTK6Q13882 451 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 TRIM16LQ309B1 348 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 VPS50Q96JG6 964 aa17.85■□□□□ 0.45
SNAPC3-202ENST00000380821 CAND2O75155 1236 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 NUP107P57740 925 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 ANTXR2P58335 489 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 GPSM2P81274 684 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 DNAJC3Q13217 504 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 KIZQ2M2Z5 673 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 ACBD5Q5T8D3 534 aaPredicted RBP17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 ACAD10Q6JQN1 1059 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 TBC1D19Q8N5T2 526 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 ACTRT1Q8TDG2 376 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 SCFD2Q8WU76 684 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 SPHKAPQ2M3C7 1700 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 MTSS1O43312 755 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 EXTL3O43909 919 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 GSNP06396 782 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 CYP19A1P11511 503 aaPredicted RBP17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 FDPSP14324 419 aaKnown RBP17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 CALB2P22676 271 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 TRAF7Q6Q0C0 670 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 SYNE4Q8N205 404 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 PHF21AQ96BD5 680 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 SLC10A4Q96EP9 437 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 LBHD1Q9BQE6 289 aaPredicted RBP17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 MTMR4Q9NYA4 1195 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 CD274Q9NZQ7 290 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 CNTNAP5Q8WYK1 1306 aa17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 TPD52L2O43399 206 aaKnown RBP17.84■□□□□ 0.45
SNAPC3-202ENST00000380821 ARIH2O95376 493 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms