RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 PTPN21Q16825 1174 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 GFOD2Q3B7J2 385 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 DNTTIP2Q5QJE6 756 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 PHF19Q5T6S3 580 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 PASD1Q8IV76 773 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 TCEAL8Q8IYN2 117 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 GIMAP1Q8WWP7 306 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 TAF4BQ92750 862 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 ATP6V1E2Q96A05 226 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 SH3KBP1Q96B97 665 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 COG3Q96JB2 828 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 SPATA25Q9BR10 227 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 CENPOQ9BU64 300 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 LUC7LQ9NQ29 371 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 TOPORSQ9NS56 1045 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 TOMM22Q9NS69 142 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 DIAPH3Q9NSV4 1193 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 C14orf119Q9NWQ9 140 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 NTMQ9P121 344 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 TBK1Q9UHD2 729 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 NOB1Q9ULX3 412 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 MUC6Q6W4X9 2439 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 CDHR2Q9BYE9 1310 aa5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 COL2A1P02458 1487 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-204ENST00000368292 LCHNA4D1U4 455 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 ZNF839A8K0R7 811 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 H0Y3Z8 333 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 AGR2O95994 175 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 ENO2P09104 434 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 GLULP15104 373 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 TYRP1P17643 537 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 LSP1P33241 339 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 GJA4P35212 333 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 RENBPP51606 427 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 ROR1Q01973 937 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 TBX2Q13207 712 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 PCBP2Q15366 365 aaKnown RBP eCLIP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 GPR158Q5T848 1215 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 FAM102BQ5T8I3 360 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 NXNQ6DKJ4 435 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 VASNQ6EMK4 673 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 ESRP1Q6NXG1 681 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 TTLL7Q6ZT98 887 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 RSRC2Q7L4I2 434 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 MCM10Q7L590 875 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 ZNF761Q86XN6 746 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 ZNF610Q8N9Z0 462 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 C1orf162Q8NEQ5 155 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 MAFAQ8NHW3 353 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 AFAP1L1Q8TED9 768 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 SMCR8Q8TEV9 937 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 CDCA5Q96FF9 252 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 CLIC6Q96NY7 704 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 STRBPQ96SI9 672 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 RHOBTB2Q9BYZ6 727 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 XYLT2Q9H1B5 865 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 PARD6AQ9NPB6 346 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 DLL4Q9NR61 685 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 CHCHD3Q9NX63 227 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 HOXC10Q9NYD6 342 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 FBXO10Q9UK96 956 aa5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 RRP15Q9Y3B9 282 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 MAGED1Q9Y5V3 778 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-204ENST00000368292 TAF1P21675 1872 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 UBR2Q8IWV8 1755 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 E2F8A0AVK6 867 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 K7ENM7 598 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 DDX3XO00571 662 aaKnown RBP eCLIP5.68□□□□□ -1.57e-10■■■□□ 16
ECHDC1-204ENST00000368292 IPO7O95373 1038 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 IL18BPO95998 194 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ZNF28P17035 718 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 SERPINB3P29508 390 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 IL13P35225 146 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 STT3AP46977 705 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 BPIFB3P59826 476 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 CCT2P78371 535 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 CHAF1AQ13111 956 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 LRRC32Q14392 662 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 PDCD1Q15116 288 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 PPP2R5BQ15173 497 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 SKIDA1Q1XH10 827 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 TTC31Q49AM3 519 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 SLC9C1Q4G0N8 1177 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 COBLL1Q53SF7 1204 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 SLC10A5Q5PT55 438 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 SWSAP1Q6NVH7 229 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 TTLL10Q6ZVT0 673 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ERC1Q8IUD2 1116 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 PJA1Q8NG27 643 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 FEZF2Q8TBJ5 459 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ADAMTS17Q8TE56 1095 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ZCCHC14Q8WYQ9 949 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 HVCN1Q96D96 273 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 FAXDC2Q96IV6 333 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ELAC2Q9BQ52 826 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 SLC13A1Q9BZW2 595 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 ZDHHC5Q9C0B5 715 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 PCIF1Q9H4Z3 704 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 RMI1Q9H9A7 625 aa5.68□□□□□ -1.5
ECHDC1-204ENST00000368292 SLC39A2Q9NP94 309 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms