RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 RIT2Q99578 217 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 MMTAG2Q9BU76 263 aaKnown RBP18.7■□□□□ 0.58
SMG5-201ENST00000361813 TOPORSQ9NS56 1045 aaPredicted RBP18.7■□□□□ 0.58
SMG5-201ENST00000361813 DGAT1O75907 488 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 DUPD1Q68J44 220 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 SLC25A41Q8N5S1 370 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 PRELID2Q8N945 189 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 SNRNP27Q8WVK2 155 aaKnown RBP18.7■□□□□ 0.58
SMG5-201ENST00000361813 ING2Q9H160 280 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 ZNF302Q9NR11 478 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 DGKIO75912 1065 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 MAP3K6O95382 1288 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 CIITAP33076 1130 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 TAF12Q16514 161 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 TTC39BQ5VTQ0 682 aaPredicted RBP18.7■□□□□ 0.58
SMG5-201ENST00000361813 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 IRF2BP2Q7Z5L9 587 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 PSPC1Q8WXF1 523 aaKnown RBP18.7■□□□□ 0.58
SMG5-201ENST00000361813 GCOM2Q9BZD3 368 aaPredicted RBP18.7■□□□□ 0.58
SMG5-201ENST00000361813 MCM8Q9UJA3 840 aa18.7■□□□□ 0.58
SMG5-201ENST00000361813 FNDC3AQ9Y2H6 1198 aaKnown RBP18.7■□□□□ 0.58
SMG5-201ENST00000361813 PSTPIP1O43586 416 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ATP9BO43861 1147 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ECE2O60344 883 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 KRT16P08779 473 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 EFTUD2Q15029 972 aaKnown RBP eCLIP18.69■□□□□ 0.583e-6■■■■□ 26.7
SMG5-201ENST00000361813 EXOC3L1Q86VI1 746 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ZNF677Q86XU0 584 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 APLFQ8IW19 511 aaPredicted RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 ATP6V1E2Q96A05 226 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 VPS39Q96JC1 886 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 CLMNQ96JQ2 1002 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ANKRD27Q96NW4 1050 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 AGAP3Q96P47 875 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 DCLK3Q9C098 648 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ACP6Q9NPH0 428 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 NUB1Q9Y5A7 615 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 PCDHA3Q9Y5H8 950 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 PROSCO94903 275 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 BRD2P25440 801 aaKnown RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 COPAP53621 1224 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 AQP5P55064 265 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 HGSNATQ68CP4 663 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 THAP11Q96EK4 314 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 UNC5CO95185 931 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ZBTB17Q13105 803 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 SPDYCQ5MJ68 293 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 KLC3Q6P597 504 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 KCTD17Q8N5Z5 321 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 SCG3Q8WXD2 468 aaKnown RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 PURBQ96QR8 312 aaKnown RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 TIPINQ9BVW5 301 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 RTFDC1Q9BY42 306 aaPredicted RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 UBXN6Q9BZV1 441 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 NACA2Q9H009 215 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 TBX20Q9UMR3 447 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 SPAG6O75602 509 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 MMP10P09238 476 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 NUDT17P0C025 328 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ARP10275 920 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 SREBF1P36956 1147 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 MTFR1Q15390 333 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 HABP4Q5JVS0 413 aaKnown RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 LRRC8EQ6NSJ5 796 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 MOXD1Q6UVY6 613 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 RNF135Q8IUD6 432 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 LNX1Q8TBB1 728 aaPredicted RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 MRPL4Q9BYD3 311 aaKnown RBP18.69■□□□□ 0.58
SMG5-201ENST00000361813 NEUROG2Q9H2A3 272 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 ARMCX1Q9P291 453 aa18.69■□□□□ 0.58
SMG5-201ENST00000361813 SLC4A1P02730 911 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 RGS7P49802 495 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 XRCC4Q13426 336 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 CATSPER1Q8NEC5 780 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 TCP10LQ8TDR4 215 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 NMD3Q96D46 503 aaKnown RBP18.68■□□□□ 0.58
SMG5-201ENST00000361813 PGBD4Q96DM1 585 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 KRT82Q9NSB4 513 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 SUGT1Q9Y2Z0 365 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 PIK3CDO00329 1044 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 ZBTB39O15060 712 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 ENTPD5O75356 428 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 PECAM1P16284 738 aaPredicted RBP18.68■□□□□ 0.58
SMG5-201ENST00000361813 SLC34A1Q06495 639 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 FASTKD1Q53R41 847 aaKnown RBP18.68■□□□□ 0.58
SMG5-201ENST00000361813 KAT5Q92993 513 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 GRID1Q9ULK0 1009 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 CCDC78A2IDD5 438 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 XPO1O14980 1071 aaKnown RBP18.68■□□□□ 0.58
SMG5-201ENST00000361813 SSTR1P30872 391 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 CYLC2Q14093 348 aaPredicted RBP18.68■□□□□ 0.58
SMG5-201ENST00000361813 SPIRE2Q8WWL2 714 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 TTYH3Q9C0H2 523 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 AURKCQ9UQB9 309 aa18.68■□□□□ 0.58
SMG5-201ENST00000361813 CSADQ9Y600 493 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms