RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 WDR72Q3MJ13 1102 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 DCAF4L1Q3SXM0 396 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 ZNF394Q53GI3 561 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TTMPQ5BVD1 217 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 LEKR1Q6ZMV7 388 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 KIAA0319LQ8IZA0 1049 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TTC39CQ8N584 583 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 EXD1Q8NHP7 514 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 GRK7Q8WTQ7 553 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 UBLCP1Q8WVY7 318 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 ARL8AQ96BM9 186 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 ACAP3Q96P50 834 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 PPP1R16BQ96T49 567 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 MTRF1LQ9UGC7 380 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 ITGA11Q9UKX5 1188 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TCRBV5S1A1TA0A578 114 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 HMGB1P1B2RPK0 211 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 STAU1O95793 577 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 ITGB3P05106 788 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 DHX9Q08211 1270 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 PCBP1Q15365 356 aaKnown RBP eCLIP19.4■□□□□ 0.79e-7■■■■■ 32.7
PDLIM7-203ENST00000359895 UAP1Q16222 522 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 SLC10A6Q3KNW5 377 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TFAP2BQ92481 460 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 SNX24Q9Y343 169 aa19.4■□□□□ 0.7
PDLIM7-203ENST00000359895 TRIP11Q15643 1979 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 CSDE1O75534 798 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 KRT14P02533 472 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 CD19P15391 556 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 ACTN2P35609 894 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 GRM5P41594 1212 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 MAP2K5Q13163 448 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 PIGHQ14442 188 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 CEP85LQ5SZL2 805 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 LRRC38Q5VT99 294 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 RUFY4Q6ZNE9 571 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 CCDC50Q8IVM0 306 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 C3orf20Q8ND61 904 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 CXorf38Q8TB03 319 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 TXLNGYQ9BZA5 131 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 GRHL1Q9NZI5 618 aa19.39■□□□□ 0.69
PDLIM7-203ENST00000359895 NRCAMQ92823 1304 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 ERICH4A6NGS2 130 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 A6NJR5 290 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 H0YGN5 161 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 MEFVO15553 781 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 RPS6KA5O75582 802 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 ITGBL1O95965 494 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 FLT3P36888 993 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 RPL21P46778 160 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 RAD23BP54727 409 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 EIF3BP55884 814 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 TAS2R40P59535 323 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 RBP5P82980 135 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 PPP1R7Q15435 360 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 MORN1Q5T089 497 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 DCUN1D2Q6PH85 259 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 ZDHHC24Q6UX98 284 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 RCOR2Q8IZ40 523 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 WDTC1Q8N5D0 677 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 NIPA2Q8N8Q9 360 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 RBM41Q96IZ5 413 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 ATP6V1G3Q96LB4 118 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 GCOM2Q9BZD3 368 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 TMBIM4Q9HC24 238 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 WDR35Q9P2L0 1181 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 USTQ9Y2C2 406 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 DERAQ9Y315 318 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 NFS1Q9Y697 457 aa19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 PDCD11Q14690 1871 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-203ENST00000359895 SHOX2O60902 331 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 MYZAPP0CAP1 466 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 SSR1P43307 286 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 PLTPP55058 493 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 GSCP56915 257 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 SKOR1P84550 965 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 PPP1R15BQ5SWA1 713 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 HPDLQ96IR7 371 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 DCLK3Q9C098 648 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 PLEKHA5Q9HAU0 1116 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 DPP3Q9NY33 737 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 DOCK3Q8IZD9 2030 aa19.37■□□□□ 0.69
PDLIM7-203ENST00000359895 SMIM35A0A1B0GVV1 85 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 CILPO75339 1184 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 GAS8O95995 478 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 RAP1GAPP47736 663 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 APLP1P51693 650 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 COPS2P61201 443 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 PTPN11Q06124 597 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 CALCOCO2Q13137 446 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 EMC10Q5UCC4 262 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 DENND1BQ6P3S1 775 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 C1orf54Q8WWF1 131 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 ART4Q93070 314 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 TMEM176AQ96HP8 235 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 MCEEQ96PE7 176 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 OSBPL8Q9BZF1 889 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 SDCBP2Q9H190 292 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 ADAMTS10Q9H324 1103 aa19.36■□□□□ 0.69
PDLIM7-203ENST00000359895 SETD4Q9NVD3 440 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms