RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 RFWD3Q6PCD5 774 aa25.41■■□□□ 1.66
DDX42-201ENST00000359353 OGFOD1Q8N543 542 aa25.41■■□□□ 1.66
DDX42-201ENST00000359353 RBBP8NLQ8NC74 664 aaPredicted RBP25.41■■□□□ 1.66
DDX42-201ENST00000359353 CNKSR1Q969H4 720 aa25.41■■□□□ 1.66
DDX42-201ENST00000359353 HAPLN2Q9GZV7 340 aa25.41■■□□□ 1.66
DDX42-201ENST00000359353 TFDP1Q14186 410 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 DLGAP5Q15398 846 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 PDK4Q16654 411 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 ANKRD22Q5VYY1 191 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 ABRAQ8N0Z2 381 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 PRR11Q96HE9 360 aaPredicted RBP25.4■■□□□ 1.66
DDX42-201ENST00000359353 NAF1Q96HR8 494 aaKnown RBP25.4■■□□□ 1.66
DDX42-201ENST00000359353 WNK4Q96J92 1243 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 RNPEPL1Q9HAU8 725 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 LRRD1A4D1F6 860 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 CCDC15Q0P6D6 951 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 MSS51Q4VC12 460 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 RFWD2Q8NHY2 731 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 NUB1Q9Y5A7 615 aa25.4■■□□□ 1.66
DDX42-201ENST00000359353 C2orf71A6NGG8 1288 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 SKIV2L2P42285 1042 aaKnown RBP25.39■■□□□ 1.66
DDX42-201ENST00000359353 GPX6P59796 221 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 SNRPFP62306 86 aaKnown RBP25.39■■□□□ 1.66
DDX42-201ENST00000359353 ZACNQ401N2 412 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 MTERF2Q49AM1 385 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 CAPRIN2Q6IMN6 1127 aaKnown RBP25.39■■□□□ 1.66
DDX42-201ENST00000359353 C15orf39Q6ZRI6 1047 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 NLRP9Q7RTR0 991 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 OR5B17Q8NGF7 314 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 FEZF2Q8TBJ5 459 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 FAM151AQ8WW52 585 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 TMEM143Q96AN5 459 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 TRIM11Q96F44 468 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 SMNDC1O75940 238 aaKnown RBP eCLIP25.39■■□□□ 1.668e-9■■■□□ 17
DDX42-201ENST00000359353 GDF10P55107 478 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 FKBP1AP62942 108 aaKnown RBP25.39■■□□□ 1.66
DDX42-201ENST00000359353 PTP4A2Q12974 167 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 CUL2Q13617 745 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 CYP4A22Q5TCH4 519 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 ARHGEF16Q5VV41 709 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.39■■□□□ 1.66
DDX42-201ENST00000359353 USP37Q86T82 979 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 CCDC125Q86Z20 511 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 ZNF75CPQ92670 426 aaPredicted RBP25.39■■□□□ 1.66
DDX42-201ENST00000359353 PDCD2LQ9BRP1 358 aa25.39■■□□□ 1.66
DDX42-201ENST00000359353 POLR3FQ9H1D9 316 aaPredicted RBP25.39■■□□□ 1.66
DDX42-201ENST00000359353 DENND2DQ9H6A0 471 aaPredicted RBP25.39■■□□□ 1.66
DDX42-201ENST00000359353 ERFP50548 548 aa25.39■■□□□ 1.65
DDX42-201ENST00000359353 KCNT1Q5JUK3 1230 aa25.39■■□□□ 1.65
DDX42-201ENST00000359353 TEX2Q8IWB9 1127 aa25.39■■□□□ 1.65
DDX42-201ENST00000359353 ALLCQ8N6M5 410 aa25.39■■□□□ 1.65
DDX42-201ENST00000359353 YIPF3Q9GZM5 350 aa25.39■■□□□ 1.65
DDX42-201ENST00000359353 MRPL47Q9HD33 250 aaKnown RBP25.39■■□□□ 1.65
DDX42-201ENST00000359353 SLC17A7Q9P2U7 560 aa25.39■■□□□ 1.65
DDX42-201ENST00000359353 ZFP69BQ9UJL9 534 aa25.39■■□□□ 1.65
DDX42-201ENST00000359353 ZNF646O15015 1829 aaPredicted RBP25.38■■□□□ 1.65
DDX42-201ENST00000359353 A0A0G2JND7 137 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 C4BPAP04003 597 aaKnown RBP25.38■■□□□ 1.65
DDX42-201ENST00000359353 ABHD2P08910 425 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 PLEKHA7Q6IQ23 1121 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 ENOSF1Q7L5Y1 443 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 WDR81Q562E7 1941 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 ENO4A6NNW6 628 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 TPBGLP0DKB5 382 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 GNAZP19086 355 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 CALB2P22676 271 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 RELL1Q8IUW5 271 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 SENP7Q9BQF6 1050 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 OSBPL1AQ9BXW6 950 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 ANKEF1Q9NU02 776 aa25.38■■□□□ 1.65
DDX42-201ENST00000359353 H0YIN7 160 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 PRPF4O43172 522 aaKnown RBP eCLIP25.37■■□□□ 1.653e-13■■□□□ 13.5
DDX42-201ENST00000359353 TYROBPO43914 113 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 ALDH3A1P30838 453 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 GTF2H1P32780 548 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 EAPPQ56P03 285 aaPredicted RBP25.37■■□□□ 1.65
DDX42-201ENST00000359353 FNBP1LQ5T0N5 605 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 CYP39A1Q9NYL5 469 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 RIPK3Q9Y572 518 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 CLUHO75153 1309 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 MAGEB2O15479 319 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 GLRA2P23416 452 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 RNASEH2BQ5TBB1 312 aaKnown RBP25.37■■□□□ 1.65
DDX42-201ENST00000359353 SPOCD1Q6ZMY3 1216 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 PTPRN2Q92932 1015 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 MIPEPQ99797 713 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 MOV10L1Q9BXT6 1211 aaKnown RBP25.37■■□□□ 1.65
DDX42-201ENST00000359353 BATF3Q9NR55 127 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 SYNPO2Q9UMS6 1093 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 PCDHA10Q9Y5I2 948 aa25.37■■□□□ 1.65
DDX42-201ENST00000359353 BRD2P25440 801 aaKnown RBP25.36■■□□□ 1.65
DDX42-201ENST00000359353 JAK3P52333 1124 aa25.36■■□□□ 1.65
DDX42-201ENST00000359353 DCUN1D2Q6PH85 259 aa25.36■■□□□ 1.65
DDX42-201ENST00000359353 NIPA1Q7RTP0 329 aa25.36■■□□□ 1.65
DDX42-201ENST00000359353 RIBC1Q8N443 379 aaPredicted RBP25.36■■□□□ 1.65
DDX42-201ENST00000359353 STK32AQ8WU08 396 aa25.36■■□□□ 1.65
DDX42-201ENST00000359353 ZWILCHQ9H900 591 aa25.36■■□□□ 1.65
DDX42-201ENST00000359353 AGO2Q9UKV8 859 aaKnown RBP25.36■■□□□ 1.65
DDX42-201ENST00000359353 TCRBV7S3A2A0A539 114 aa25.36■■□□□ 1.65
DDX42-201ENST00000359353 PCK1P35558 622 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms