RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 XPOTO43592 962 aaKnown RBP15.68■□□□□ 0.1
CXCL12-201ENST00000343575 SASH3O75995 380 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 SEC31AO94979 1220 aaKnown RBP15.68■□□□□ 0.1
CXCL12-201ENST00000343575 FMO1Q01740 532 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 LONRF2Q1L5Z9 754 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 LIMS2Q7Z4I7 341 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 FMNL3Q8IVF7 1028 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 GOLGA6L1Q8N7Z2 621 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 RBBP8NLQ8NC74 664 aaPredicted RBP15.68■□□□□ 0.1
CXCL12-201ENST00000343575 TWNKQ96RR1 684 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 DEF6Q9H4E7 631 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 TMEM161AQ9NX61 479 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 NME7Q9Y5B8 376 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 TDRD15B5MCY1 1934 aaKnown RBP15.68■□□□□ 0.1
CXCL12-201ENST00000343575 ALPK3Q96L96 1907 aa15.68■□□□□ 0.1
CXCL12-201ENST00000343575 CLSTN1O94985 981 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 TIMP1P01033 207 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 MMEP08473 750 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 CFHP08603 1231 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 CCDC172P0C7W6 258 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 ACTN2P35609 894 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 CLCNKBP51801 687 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 LILRA4P59901 499 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 MYO1EQ12965 1108 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 SOWAHAQ2M3V2 549 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 CD300LGQ6UXG3 332 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 LEKR1Q6ZMV7 388 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.67■□□□□ 0.1
CXCL12-201ENST00000343575 ELAC1Q9H777 363 aaKnown RBP15.67■□□□□ 0.1
CXCL12-201ENST00000343575 UBN1Q9NPG3 1134 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 SLC38A7Q9NVC3 462 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 TAS2R14Q9NYV8 317 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 TRIM10Q9UDY6 481 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 ADAM21Q9UKJ8 722 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 RAB21Q9UL25 225 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 INPP5FQ9Y2H2 1132 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 PCDHA13Q9Y5I0 950 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 KPNA7A9QM74 516 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 CILPO75339 1184 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 ANXA13P27216 316 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 ZNF394Q53GI3 561 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
CXCL12-201ENST00000343575 PACSIN1Q9BY11 444 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 CYP3A43Q9HB55 503 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 GDAP2Q9NXN4 497 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 SNX9Q9Y5X1 595 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 DUSP10Q9Y6W6 482 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 MICAL3Q7RTP6 2002 aa15.67■□□□□ 0.1
CXCL12-201ENST00000343575 CASTOR2A6NHX0 329 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 FANCGO15287 622 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 DDHD2O94830 711 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 CSF2RAP15509 400 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 GATMP50440 423 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 RAD23BP54727 409 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 KRT83P78385 493 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 CDR2Q01850 454 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 INCA1Q0VD86 236 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 GRIK3Q13003 919 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 UPP1Q16831 310 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 ALKBH5Q6P6C2 394 aaKnown RBP15.66■□□□□ 0.1
CXCL12-201ENST00000343575 FAM43BQ6ZT52 329 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-201ENST00000343575 ZNF280BQ86YH2 543 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 MSANTD4Q8NCY6 345 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 TFAP2BQ92481 460 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 WDR24Q96S15 920 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 MRPL45Q9BRJ2 306 aaKnown RBP15.66■□□□□ 0.1
CXCL12-201ENST00000343575 IRX2Q9BZI1 471 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-201ENST00000343575 ELOVL4Q9GZR5 314 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 CDC23Q9UJX2 597 aa15.66■□□□□ 0.1
CXCL12-201ENST00000343575 KIF5CO60282 957 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 TAF6P49848 677 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 VAV2P52735 878 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 DSC1Q08554 894 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 ORC1Q13415 861 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 SPA17Q15506 151 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.65■□□□□ 0.1
CXCL12-201ENST00000343575 ZNF662Q6ZS27 426 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 KBTBD7Q8WVZ9 684 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 MMS19Q96T76 1030 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 PRDM5Q9NQX1 630 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-201ENST00000343575 FAM170AA1A519 330 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 F8W810 466 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 PODXLO00592 558 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 TNFAIP3P21580 790 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 PNPLA4P41247 253 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 MAGEA1P43355 309 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 TNNT3P45378 269 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-201ENST00000343575 PDE6CP51160 858 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 TNNC1P63316 161 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 TUSC3Q13454 348 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 NOMO2Q5JPE7 1267 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 SMYD5Q6GMV2 418 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 GLB1LQ6UWU2 654 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 SLC4A11Q8NBS3 891 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 ZNF606Q8WXB4 792 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 CASD1Q96PB1 797 aa15.65■□□□□ 0.1
CXCL12-201ENST00000343575 TBC1D13Q9NVG8 400 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms