RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 VNN2O95498 520 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 CENPPQ6IPU0 288 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 ATAD1Q8NBU5 361 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 RSAD2Q8WXG1 361 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 CCDC127Q96BQ5 260 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 CGRRF1Q99675 332 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 RTP3Q9BQQ7 232 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 KCTD10Q9H3F6 313 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 HSFX1Q9UBD0 423 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 DUSP12Q9UNI6 340 aa29.72■■■□□ 2.35
ATPAF1-201ENST00000329231 ANHXE9PGG2 379 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 PDXKO00764 312 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 ZNF197O14709 1029 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 SMARCB1Q12824 385 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 HTR4Q13639 388 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 KCNB1Q14721 858 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 SLC39A12Q504Y0 691 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 SLC9A9Q8IVB4 645 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 TMEM86AQ8N2M4 240 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 PDCL2Q8N4E4 241 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 TMEM174Q8WUU8 243 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 CEP72Q9P209 647 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 RAPGEFL1Q9UHV5 662 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 SNX9Q9Y5X1 595 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 TSC2P49815 1807 aa29.71■■■□□ 2.35
ATPAF1-201ENST00000329231 ALDH1A3P47895 512 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 SLC5A9Q2M3M2 681 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 CYP4A22Q5TCH4 519 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 SCARA3Q6AZY7 606 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 MTSS1LQ765P7 747 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 PDZD4Q76G19 769 aaPredicted RBP29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 TRAPPC11Q7Z392 1133 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 SUGP1Q8IWZ8 645 aaKnown RBP29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 NPAS3Q8IXF0 933 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 DCP1BQ8IZD4 617 aaKnown RBP29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 FMR1NBQ8N0W7 255 aaPredicted RBP29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 SLC44A3Q8N4M1 653 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 TOP6BLQ8N6T0 577 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 LEMD2Q8NC56 503 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 SPATA18Q8TC71 538 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 C2orf15Q8WU43 125 aaKnown RBP29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 HPDLQ96IR7 371 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 CRISPLD1Q9H336 500 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 DMAC2Q9NW81 257 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 GDE1Q9NZC3 331 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 L1RE1Q9UN81 338 aa29.7■■■□□ 2.35
ATPAF1-201ENST00000329231 TRIOO75962 3097 aa29.7■■■□□ 2.34
ATPAF1-201ENST00000329231 EPHB3P54753 998 aa29.69■■■□□ 2.34
ATPAF1-201ENST00000329231 TSPY1Q01534 308 aa29.69■■■□□ 2.34
ATPAF1-201ENST00000329231 FBXL6Q8N531 539 aa29.69■■■□□ 2.34
ATPAF1-201ENST00000329231 ING5Q8WYH8 240 aa29.69■■■□□ 2.34
ATPAF1-201ENST00000329231 SLC27A5Q9Y2P5 690 aa29.69■■■□□ 2.34
ATPAF1-201ENST00000329231 NUMBLQ9Y6R0 609 aa29.69■■■□□ 2.34
ATPAF1-201ENST00000329231 MICAL2O94851 1124 aa29.68■■■□□ 2.34
ATPAF1-201ENST00000329231 TUFMP49411 452 aaKnown RBP29.68■■■□□ 2.34
ATPAF1-201ENST00000329231 PRSS36Q5K4E3 855 aa29.68■■■□□ 2.34
ATPAF1-201ENST00000329231 ASAH2Q9NR71 780 aa29.68■■■□□ 2.34
ATPAF1-201ENST00000329231 CALUO43852 315 aaPredicted RBP29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 NR3C1P04150 777 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 MYL7Q01449 175 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 FAM160A1Q05DH4 1040 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 DPH6Q7L8W6 267 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 SPPL2BQ8TCT7 592 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 ACBD6Q9BR61 282 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 DDX43Q9NXZ2 648 aaKnown RBP29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 ARIH1Q9Y4X5 557 aaPredicted RBP29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 ASB3Q9Y575 518 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 NOTCH4Q99466 2003 aa29.67■■■□□ 2.34
ATPAF1-201ENST00000329231 LHX1P48742 406 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 EPHA5P54756 1037 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 SNW1Q13573 536 aaKnown RBP29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 PARM1Q6UWI2 310 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 LRRTM3Q86VH5 581 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 ADGRF2Q8IZF7 708 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 HS6ST3Q8IZP7 471 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 ENGASEQ8NFI3 743 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 MCRS1Q96EZ8 462 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 CHMP5Q9NZZ3 219 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 FBXL21Q9UKT6 434 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 TRAF3IP3Q9Y228 551 aa29.66■■■□□ 2.34
ATPAF1-201ENST00000329231 NARSO43776 548 aaKnown RBP29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 SRFP11831 508 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 CEBPBP17676 345 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 AP3M2P53677 418 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 NFE2Q16621 373 aaPredicted RBP29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 SOWAHAQ2M3V2 549 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 MGAT5BQ3V5L5 792 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 GUF1Q8N442 669 aaKnown RBP29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 TTC9BQ8N6N2 239 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 FGF14Q92915 247 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 TCEAL4Q96EI5 215 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 SEPT5Q99719 369 aaPredicted RBP29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 GZF1Q9H116 711 aaPredicted RBP29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 DNAJC25Q9H1X3 360 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 FRMD4BQ9Y2L6 1034 aa29.65■■■□□ 2.34
ATPAF1-201ENST00000329231 MYL4P12829 197 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 PCSK1P29120 753 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 TRPC3Q13507 836 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 PNOCQ13519 176 aa29.64■■■□□ 2.34
ATPAF1-201ENST00000329231 ITIH5Q86UX2 942 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms