RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 USP17L6PQ6QN14 398 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 IRF2BP2Q7Z5L9 587 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 NET1Q7Z628 596 aaPredicted RBP17.42■□□□□ 0.38
PACS1-201ENST00000320580 LRRC57Q8N9N7 239 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 SCYL1Q96KG9 808 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 PHF12Q96QT6 1004 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 PPCSQ9HAB8 311 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 STRIP2Q9ULQ0 834 aa17.42■□□□□ 0.38
PACS1-201ENST00000320580 STAM2O75886 525 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 C21orf59P57076 290 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 MTMR2Q13614 643 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 ZBTB8BQ8NAP8 495 aaPredicted RBP17.41■□□□□ 0.38
PACS1-201ENST00000320580 NKX2-3Q8TAU0 364 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 DEPDC1BQ8WUY9 529 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 PPP1R36Q96LQ0 422 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 GANQ9H2C0 597 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 BLOC1S4Q9NUP1 217 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 C15orf38-AP3S2A0A0A6YYH1 394 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 RBM47A0AV96 593 aaKnown RBP17.41■□□□□ 0.38
PACS1-201ENST00000320580 SLC37A4O43826 429 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 ASMTLO95671 621 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 UQCRBP14927 111 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 SMAD1Q15797 465 aaKnown RBP17.41■□□□□ 0.38
PACS1-201ENST00000320580 ARPINQ7Z6K5 226 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 DEFB107AQ8IZN7 70 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 FAF2Q96CS3 445 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 EBF3Q9H4W6 596 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 CYLDQ9NQC7 956 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 LRRC4BQ9NT99 713 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 SLC16A3O15427 465 aaKnown RBP17.41■□□□□ 0.38
PACS1-201ENST00000320580 P4HA2O15460 535 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 INAQ16352 499 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 ASTE1Q2TB18 679 aaPredicted RBP17.41■□□□□ 0.38
PACS1-201ENST00000320580 DNAJC24Q6P3W2 148 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 DPP8Q6V1X1 898 aaPredicted RBP17.41■□□□□ 0.38
PACS1-201ENST00000320580 KCTD1Q719H9 257 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 JADE3Q92613 823 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 PAFAH2Q99487 392 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 AK5Q9Y6K8 562 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 SPATA31A1Q5TZJ5 1347 aa17.41■□□□□ 0.38
PACS1-201ENST00000320580 FAM237BA0A1B0GVD1 139 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 PRUNE1Q86TP1 453 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 RFWD2Q8NHY2 731 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ZNF512BQ96KM6 892 aaPredicted RBP17.4■□□□□ 0.38
PACS1-201ENST00000320580 PLGRKTQ9HBL7 147 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 SMYD2Q9NRG4 433 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 PTTG2Q9NZH5 202 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 TMEM59LQ9UK28 342 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ACTL7BQ9Y614 415 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 TLR3O15455 904 aaKnown RBP17.4■□□□□ 0.38
PACS1-201ENST00000320580 CBFA2T3O75081 653 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 NOL4O94818 638 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 AMPD1P23109 780 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 HMOX2P30519 316 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 LPIN1Q14693 890 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 AOC3Q16853 763 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ACAD11Q709F0 780 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 C10orf88Q9H8K7 445 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 KIAA1586Q9HCI6 787 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 DDX28Q9NUL7 540 aaKnown RBP17.4■□□□□ 0.38
PACS1-201ENST00000320580 TAS2R14Q9NYV8 317 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 SATB2Q9UPW6 733 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 SMIM22K7EJ46 135 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 PEX1O43933 1283 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 DGKIO75912 1065 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 PIAS1O75925 651 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 VAMP7P51809 220 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 SLC25A3Q00325 362 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 FOLH1Q04609 750 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 GALNTL6Q49A17 601 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ZBTB46Q86UZ6 589 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ULK2Q8IYT8 1036 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ZNF786Q8N393 782 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 TRIM49D1C9J1S8 452 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 BMP3P12645 472 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ATICP31939 592 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 SSTR3P32745 418 aaPredicted RBP17.4■□□□□ 0.38
PACS1-201ENST00000320580 FXR2P51116 673 aaKnown RBP eCLIP17.4■□□□□ 0.38
PACS1-201ENST00000320580 CASP7P55210 303 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 GSTCDQ8NEC7 633 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 FAM96AQ9H5X1 160 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 WDR37Q9Y2I8 494 aa17.4■□□□□ 0.38
PACS1-201ENST00000320580 ARHGEF37A1IGU5 675 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 ASLP04424 464 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 VCLP18206 1134 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 PDAP1Q13442 181 aaKnown RBP17.39■□□□□ 0.37
PACS1-201ENST00000320580 PARP10Q53GL7 1025 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 ASPRV1Q53RT3 343 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 SCYL2Q6P3W7 929 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 PNMA5Q96PV4 448 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 NUDT12Q9BQG2 462 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 ZDHHC18Q9NUE0 388 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 WEE2P0C1S8 567 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 PRDX5P30044 214 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 CDC16Q13042 620 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
PACS1-201ENST00000320580 ZDHHC24Q6UX98 284 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 TTC16Q8NEE8 873 aa17.39■□□□□ 0.37
PACS1-201ENST00000320580 HBS1LQ9Y450 684 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms