RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 FBXO6Q9NRD1 293 aaPredicted RBP15.78■□□□□ 0.12
XRCC1-201ENST00000262887 MTO1Q9Y2Z2 717 aaKnown RBP15.78■□□□□ 0.12
XRCC1-201ENST00000262887 COL14A1Q05707 1796 aaKnown RBP15.78■□□□□ 0.12
XRCC1-201ENST00000262887 PLSCR1O15162 318 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 GAS7O60861 476 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 CYP3A4P08684 503 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 CDK16Q00536 496 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 PPP2R5CQ13362 524 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 DAW1Q8N136 415 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 MIPOL1Q8TD10 442 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 MANSC1Q9H8J5 431 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 COMMD3-BMI1R4GMX3 469 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 ZNFX1Q9P2E3 1918 aaKnown RBP15.78■□□□□ 0.12
XRCC1-201ENST00000262887 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
XRCC1-201ENST00000262887 GRIN3BO60391 1043 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 RARBP10826 455 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 CDK7P50613 346 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 RFX8Q6ZV50 586 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 GLIS1Q8NBF1 620 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 SMC1BQ8NDV3 1235 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 DHX38Q92620 1227 aaKnown RBP15.77■□□□□ 0.12
XRCC1-201ENST00000262887 TMEM120AQ9BXJ8 343 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 FHDC1Q9C0D6 1143 aaPredicted RBP15.77■□□□□ 0.12
XRCC1-201ENST00000262887 IL1RAPL1Q9NZN1 696 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 GGA1Q9UJY5 639 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 COL24A1Q17RW2 1714 aa15.77■□□□□ 0.12
XRCC1-201ENST00000262887 F8W8V4 182 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 ZBED4O75132 1171 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 CALCAP01258 141 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 ZSCAN5DPP0CG00 497 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 KRT5P13647 590 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 CD58P19256 250 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 RAP1GDS1P52306 607 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 RASA2Q15283 850 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 C2CD6Q53TS8 623 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 LLGL2Q6P1M3 1020 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 RHOT1Q8IXI2 618 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 MCOLN2Q8IZK6 566 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 ZNF276Q8N554 614 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 FAM161BQ96MY7 647 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 ACCSQ96QU6 501 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 HAPLN3Q96S86 360 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 ECSITQ9BQ95 431 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 TSSK1BQ9BXA7 367 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 TMEM165Q9HC07 324 aa15.77■□□□□ 0.11
XRCC1-201ENST00000262887 GOLGA8IPA6NC78 632 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 GOLGA8JA6NMD2 632 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 ANPEPP15144 967 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 ARSEP51690 589 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 LSAMPQ13449 338 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 TRIM42Q8IWZ5 723 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 HELQQ8TDG4 1101 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 OLFM3Q96PB7 478 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 IWS1Q96ST2 819 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 ZNF148Q9UQR1 794 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 CNTNAP4Q9C0A0 1308 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 ATP2A1O14983 1001 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 PSTPIP1O43586 416 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 PENKP01210 267 aaPredicted RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 ATP2B4P23634 1241 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 GEMIN4P57678 1058 aaKnown RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 PTP4A2Q12974 167 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 GPS1Q13098 491 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 SHROOM1Q2M3G4 852 aaPredicted RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 LRRC6Q86X45 466 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 TCP10LQ8TDR4 215 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 CPA5Q8WXQ8 436 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 ELMO3Q96BJ8 720 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 CCDC127Q96BQ5 260 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 CCDC17Q96LX7 622 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 NT5C1BQ96P26 610 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 FNBP1Q96RU3 617 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 LXNQ9BS40 222 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 VPS11Q9H270 941 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 KCNK13Q9HB14 408 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 ALG13Q9NP73 1137 aaKnown RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 AVENQ9NQS1 362 aaPredicted RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 PROSCO94903 275 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 NOP14P78316 857 aaKnown RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 GTF2IP78347 998 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 PDIA2Q13087 525 aaKnown RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 KRT39Q6A163 491 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 CENPUQ71F23 418 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 MARK2Q7KZI7 788 aaKnown RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 LCA5Q86VQ0 697 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 CCDC110Q8TBZ0 833 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 C12orf65Q9H3J6 166 aaKnown RBP15.76■□□□□ 0.11
XRCC1-201ENST00000262887 PICK1Q9NRD5 415 aa15.76■□□□□ 0.11
XRCC1-201ENST00000262887 PMM2O15305 246 aa15.75■□□□□ 0.11
XRCC1-201ENST00000262887 TM9SF1O15321 606 aa15.75■□□□□ 0.11
XRCC1-201ENST00000262887 MAGEC1O60732 1142 aa15.75■□□□□ 0.11
XRCC1-201ENST00000262887 ADRB2P07550 413 aa15.75■□□□□ 0.11
XRCC1-201ENST00000262887 SH3BGRP55822 239 aaPredicted RBP15.75■□□□□ 0.11
XRCC1-201ENST00000262887 TAS2R40P59535 323 aa15.75■□□□□ 0.11
XRCC1-201ENST00000262887 SFSWAPQ12872 951 aaKnown RBP15.75■□□□□ 0.11
XRCC1-201ENST00000262887 KAZNQ674X7 775 aa15.75■□□□□ 0.11
XRCC1-201ENST00000262887 C12orf56Q8IXR9 622 aa15.75■□□□□ 0.11
XRCC1-201ENST00000262887 ST13P4Q8IZP2 240 aaPredicted RBP15.75■□□□□ 0.11
XRCC1-201ENST00000262887 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.75■□□□□ 0.11
XRCC1-201ENST00000262887 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms