RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 MIER2Q8N344 545 aa11.58□□□□□ -0.56
MSH6-201ENST00000234420 FAM136AQ96C01 138 aa11.58□□□□□ -0.56
MSH6-201ENST00000234420 ZNF274Q96GC6 653 aaPredicted RBP11.58□□□□□ -0.56
MSH6-201ENST00000234420 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.56
MSH6-201ENST00000234420 FAM25AB3EWG3 89 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 FAM25CB3EWG5 89 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 FAM25GB3EWG6 89 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 RGS7P49802 495 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 GRSF1Q12849 480 aaKnown RBP eCLIP11.57□□□□□ -0.56
MSH6-201ENST00000234420 CYP4A22Q5TCH4 519 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 CCSER1Q9C0I3 900 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 C14orf93Q9H972 538 aaKnown RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 ZNF862O60290 1169 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 VAMP4O75379 141 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 C10orf120Q5SQS8 335 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 ANKMY2Q8IV38 441 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 BBS7Q8IWZ6 715 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 EML4Q9HC35 981 aaKnown RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 IMPAD1Q9NX62 359 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 TDRKHQ9Y2W6 561 aaKnown RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 MYO9BQ13459 2157 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 CACNA2D1P54289 1103 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 TMEM51Q9NW97 253 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 EURLQ9NYK6 297 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 SPASTQ9UBP0 616 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 PNMA6EA0A0J9YXQ4 647 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 UBE2Q2LH0YL09 131 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 TRIQKQ629K1 86 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 DGKHQ86XP1 1220 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 CLYBLQ8N0X4 340 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 MB21D1Q8N884 522 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 CMTM5Q96DZ9 223 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 DHX35Q9H5Z1 703 aaKnown RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 AAASQ9NRG9 546 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 TARSL2A2RTX5 802 aaKnown RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 ATP9AO75110 1047 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 FKBP3Q00688 224 aaKnown RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 LONRF1Q17RB8 773 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 ZNF57Q68EA5 555 aaPredicted RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 TMEM270Q6UE05 265 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 TCAIMQ8N3R3 496 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 PABPC5Q96DU9 382 aaKnown RBP11.57□□□□□ -0.56
MSH6-201ENST00000234420 PTH1RQ03431 593 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 VAC14Q08AM6 782 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 CLEC4GQ6UXB4 293 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 SPATA16Q9BXB7 569 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 CHKBQ9Y259 395 aa11.57□□□□□ -0.56
MSH6-201ENST00000234420 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 CHRNA3P32297 505 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 IRAK1P51617 712 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 HPCAP84074 193 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 SRSF11Q05519 484 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 ENKURQ8TC29 256 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 C17orf80Q9BSJ5 609 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 DIS3Q9Y2L1 958 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 ERVV-2B6SEH9 535 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 SRP72O76094 671 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 ABCE1P61221 599 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 STK4Q13043 487 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 EZH2Q15910 746 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 RASGRP2Q7LDG7 609 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 SHCBP1LQ9BZQ2 653 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 POLR3FQ9H1D9 316 aaPredicted RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 RNASEH1O60930 286 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 ASNSP08243 561 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 ARF4P18085 180 aaPredicted RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 ZRANB3Q5FWF4 1079 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 UBE2Q1Q7Z7E8 422 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 GIMAP8Q8ND71 665 aaPredicted RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 DNAJC1Q96KC8 554 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 C8orf4Q9NR00 106 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 ABHD10Q9NUJ1 306 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 MAP3K1Q13233 1512 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 ZMYM6O95789 1325 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 PARNO95453 639 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 CDK8P49336 464 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 MAPK10P53779 464 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 ITGADQ13349 1161 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 KCNB1Q14721 858 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 SCFD1Q8WVM8 642 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 NSL1Q96IY1 281 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 CHID1Q9BWS9 393 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 KANSL2Q9H9L4 492 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 A0A1W2PQ27 194 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 A0A1W2PQ64 194 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 A0A1W2PQD8 194 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 BIRC5O15392 142 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 KBTBD3Q8NAB2 608 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 CERKQ8TCT0 537 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 GGA3Q9NZ52 723 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 SCAF11Q99590 1463 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 POTEFA5A3E0 1075 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 GRAP2O75791 330 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 CSF1RP07333 972 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 HSPA13P48723 471 aa11.56□□□□□ -0.56
MSH6-201ENST00000234420 CCDC137Q6PK04 289 aaKnown RBP11.56□□□□□ -0.56
MSH6-201ENST00000234420 CYP4X1Q8N118 509 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms