RNA–Protein interactions for RNA: RDN58-2

RDN58-2, Transcript of 5.8S ribosomal RNA (5.8S rRNA), yeastyeast

Gene RDN58-2, Length 158 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN58-2RDN58-2 PLP1Q04004 230 aa2.21□□□□□ -2.06
RDN58-2RDN58-2 YOR342CQ12182 319 aa2.21□□□□□ -2.06
RDN58-2RDN58-2 POR1P04840 283 aaKnown RBP2.2□□□□□ -2.06
RDN58-2RDN58-2 NSP1P14907 823 aaKnown RBP2.2□□□□□ -2.06
RDN58-2RDN58-2 YOR062CP36025 268 aa2.2□□□□□ -2.06
RDN58-2RDN58-2 PHO88P38264 188 aaPredicted RBP2.2□□□□□ -2.06
RDN58-2RDN58-2 EDC3P39998 551 aaKnown RBP2.2□□□□□ -2.06
RDN58-2RDN58-2 TIR3P40552 269 aa2.2□□□□□ -2.06
RDN58-2RDN58-2 TMA22P47089 198 aaPredicted RBP2.2□□□□□ -2.06
RDN58-2RDN58-2 TDA4P47153 279 aa2.2□□□□□ -2.06
RDN58-2RDN58-2 DOC1P53068 250 aa2.2□□□□□ -2.06
RDN58-2RDN58-2 HPT1Q04178 221 aaKnown RBP2.2□□□□□ -2.06
RDN58-2RDN58-2 YLR053CQ12026 108 aa2.2□□□□□ -2.06
RDN58-2RDN58-2 EMC6Q12431 108 aa2.2□□□□□ -2.06
RDN58-2RDN58-2 RDI1Q12434 202 aa2.2□□□□□ -2.06
RDN58-2RDN58-2 PEX4P29340 183 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 TVP38P36164 337 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 YBR285WP38354 144 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 TVP23P38962 199 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 MTW1P39731 289 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 RFC2P40348 353 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 SOL1P50278 321 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 HSK3P69852 69 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 NUP49Q02199 472 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 FYV12Q08559 129 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 ODC2Q99297 307 aa2.19□□□□□ -2.06
RDN58-2RDN58-2 PDR18P53756 1333 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 YAR023CD6VPM8 179 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 SCL1P21243 252 aaKnown RBP2.18□□□□□ -2.06
RDN58-2RDN58-2 YCR023CP25351 611 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 KDX1P36005 433 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 FMP23P38231 175 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 VTC1P40046 129 aaRIP-Chip data2.18□□□□□ -2.06not detected
RDN58-2RDN58-2 YER134CP40081 178 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 YNL217WP40152 326 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 YFL019CP43576 117 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 VPS71Q03433 280 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 MAK3Q03503 176 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 DYN3Q04949 312 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 NAT3Q06504 195 aa2.18□□□□□ -2.06
RDN58-2RDN58-2 FSF1Q12029 327 aaKnown RBP2.18□□□□□ -2.06
RDN58-2RDN58-2 RAS2P01120 322 aaKnown RBP2.17□□□□□ -2.06
RDN58-2RDN58-2 CSH1P38287 376 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 YHR022CP38763 256 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 NSG1P38837 291 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 SBH1P52870 82 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 BOL2P53082 120 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 RGM1Q00453 211 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 CYT2Q00873 224 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 YDR476CQ03362 224 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 DGK1Q12382 290 aa2.17□□□□□ -2.06
RDN58-2RDN58-2 AGE2P40529 298 aa2.16□□□□□ -2.06
RDN58-2RDN58-2 DAN1P47178 298 aa2.16□□□□□ -2.06
RDN58-2RDN58-2 ERG25P53045 309 aa2.16□□□□□ -2.06
RDN58-2RDN58-2 MPC3P53311 146 aa2.16□□□□□ -2.06
RDN58-2RDN58-2 MPA43P53583 542 aaPredicted RBP2.16□□□□□ -2.06
RDN58-2RDN58-2 DIG2Q03373 323 aaKnown RBP2.16□□□□□ -2.06
RDN58-2RDN58-2 YMR295CQ03559 197 aa2.16□□□□□ -2.06
RDN58-2RDN58-2 MEU1Q07938 337 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
RDN58-2RDN58-2 NSL1Q12143 216 aa2.16□□□□□ -2.06
RDN58-2RDN58-2 PET20Q99373 253 aa2.16□□□□□ -2.06
RDN58-2RDN58-2 SPO13P23624 291 aa2.15□□□□□ -2.07
RDN58-2RDN58-2 BUB2P26448 306 aaPredicted RBP2.15□□□□□ -2.07
RDN58-2RDN58-2 CPR5P35176 225 aa2.15□□□□□ -2.07
RDN58-2RDN58-2 ERJ5P43613 295 aaPredicted RBP2.15□□□□□ -2.07
RDN58-2RDN58-2 YGL101WP53144 215 aa2.15□□□□□ -2.07
RDN58-2RDN58-2 TMA20P89886 181 aaPredicted RBP2.15□□□□□ -2.07
RDN58-2RDN58-2 TIR1P10863 254 aa2.14□□□□□ -2.07
RDN58-2RDN58-2 THI74Q04083 370 aa2.14□□□□□ -2.07
RDN58-2RDN58-2 SHH3Q04487 196 aa2.14□□□□□ -2.07
RDN58-2RDN58-2 YPR127WQ06494 345 aa2.14□□□□□ -2.07
RDN58-2RDN58-2 YPR202WQ08993 238 aa2.14□□□□□ -2.07
RDN58-2RDN58-2 DAS2Q12084 232 aa2.14□□□□□ -2.07
RDN58-2RDN58-2 YLR236CA0A023PZG4 107 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 FZF1P32805 299 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 YBR209WP38311 105 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 CUP9P41817 306 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 TTI2P47168 421 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 NQM1P53228 333 aaPredicted RBP2.13□□□□□ -2.07
RDN58-2RDN58-2 CGI121Q03705 181 aaKnown RBP2.13□□□□□ -2.07
RDN58-2RDN58-2 YMR253CQ04835 414 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 YDL180WQ12301 547 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 YLR412C-AQ3E742 68 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 ATG40Q99325 256 aa2.13□□□□□ -2.07
RDN58-2RDN58-2 MET5P47169 1442 aa2.12□□□□□ -2.07
RDN58-2RDN58-2 PET54P10834 293 aa2.12□□□□□ -2.07
RDN58-2RDN58-2 PAM17P36147 197 aa2.12□□□□□ -2.07
RDN58-2RDN58-2 SPC25P40014 221 aa2.12□□□□□ -2.07
RDN58-2RDN58-2 GAL83Q04739 417 aa2.12□□□□□ -2.07
RDN58-2RDN58-2 YHR086W-AQ3E746 53 aa2.12□□□□□ -2.07
RDN58-2RDN58-2 DDI2P0CH63 225 aa2.11□□□□□ -2.07
RDN58-2RDN58-2 DDI3P0CH64 225 aa2.11□□□□□ -2.07
RDN58-2RDN58-2 RPL2AP0CX45 254 aaKnown RBP2.11□□□□□ -2.07
RDN58-2RDN58-2 RPL2BP0CX46 254 aaKnown RBP2.11□□□□□ -2.07
RDN58-2RDN58-2 PEX34P25584 144 aa2.11□□□□□ -2.07
RDN58-2RDN58-2 STP22P25604 385 aa2.11□□□□□ -2.07
RDN58-2RDN58-2 SRP102P36057 244 aaPredicted RBP2.11□□□□□ -2.07
RDN58-2RDN58-2 SLM6P38343 150 aa2.11□□□□□ -2.07
RDN58-2RDN58-2 SVP26P38869 228 aa2.11□□□□□ -2.07
RDN58-2RDN58-2 GAA1P39012 614 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms