RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 SMARCC2Q8TAQ2 1214 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 FNBP1Q96RU3 617 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 TMEM209Q96SK2 561 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 MAP7D2Q96T17 732 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 PAAF1Q9BRP4 392 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 LRRCC1Q9C099 1032 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 SUV39H2Q9H5I1 410 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 CAPN10Q9HC96 672 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 KCNH7Q9NS40 1196 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 DNAAF2Q9NVR5 837 aaKnown RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 ADAM28Q9UKQ2 775 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 THADAQ6YHU6 1953 aa7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 TNRC6BQ9UPQ9 1833 aaKnown RBP7.72□□□□□ -1.17
SCAMP1-206ENST00000618166 TNFRSF10BO14763 440 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 RRP8O43159 456 aaKnown RBP7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 ATG13O75143 517 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 SKIP12755 728 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 PTPN2P17706 415 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 OR1D2P34982 312 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 SLC26A2P50443 739 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 RAB27AP51159 221 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 PTK2Q05397 1052 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 GFPT1Q06210 699 aaPredicted RBP7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 FCHO2Q0JRZ9 810 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 CCDC173Q0VFZ6 552 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 TMEM196Q5HYL7 178 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 ZMYM1Q5SVZ6 1142 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 UBXN11Q5T124 520 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 ANO7Q6IWH7 933 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 SWSAP1Q6NVH7 229 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 MRPL10Q7Z7H8 261 aaKnown RBP7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 YAF2Q8IY57 180 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 CKAP2LQ8IYA6 745 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 DEFB119Q8N690 84 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 TTC9Q92623 222 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 EZH1Q92800 747 aaPredicted RBP7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 PGBD4Q96DM1 585 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 WBP1Q96G27 269 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 GAD1Q99259 594 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 TRPV4Q9HBA0 871 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 CPNE5Q9HCH3 593 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 ZNF302Q9NR11 478 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 KIAA1522Q9P206 1035 aaPredicted RBP7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 KANSL3Q9P2N6 904 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 MAD2L2Q9UI95 211 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 PILRBQ9UKJ0 227 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 PCOLCE2Q9UKZ9 415 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 SLC6A14Q9UN76 642 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 SPENQ96T58 3664 aaKnown RBP7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 BSNQ9UPA5 3926 aa7.71□□□□□ -1.17
SCAMP1-206ENST00000618166 SALL3Q9BXA9 1300 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 A0A087WZ62 844 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 ARL5CA6NH57 179 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 OTOL1A6NHN0 477 aaPredicted RBP7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 CYTH3O43739 400 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 DKK1O94907 266 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 RLBP1P12271 317 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 HLA-EP13747 358 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 PLCB2Q00722 1185 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 NFATC3Q12968 1075 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 TEAD2Q15562 447 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 C2orf27AQ580R0 203 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 STXBP5Q5T5C0 1151 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 ARHGAP40Q5TG30 622 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 PDZD4Q76G19 769 aaPredicted RBP7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 SYT13Q7L8C5 426 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 GLRX5Q86SX6 157 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 ITPRIPQ8IWB1 547 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 SPACA3Q8IXA5 215 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 GPR65Q8IYL9 337 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 ENAHQ8N8S7 591 aaPredicted RBP7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 SMG8Q8ND04 991 aaKnown RBP7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 MDGA1Q8NFP4 955 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 EDARADDQ8WWZ3 215 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 SDF4Q9BRK5 362 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 FDXACB1Q9BRP7 624 aaPredicted RBP7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 TTPALQ9BTX7 342 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 COLEC11Q9BWP8 271 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 PRDM16Q9HAZ2 1276 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 GDF2Q9UK05 429 aaPredicted RBP7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 HES2Q9Y543 173 aa7.71□□□□□ -1.18
SCAMP1-206ENST00000618166 ESPNB1AK53 854 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 IPO8O15397 1037 aaKnown RBP7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 FGAP02671 866 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 SERPINF2P08697 491 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 CT47B1P0C2W7 299 aaPredicted RBP7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 MYL4P12829 197 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 IGFBP6P24592 240 aaPredicted RBP7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 RAB15P59190 212 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 RHDQ02161 417 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 POU4F2Q12837 409 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 MYO1EQ12965 1108 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 SERINC3Q13530 473 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 RAB33AQ14088 237 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 UBE2SQ16763 222 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 CCDC157Q569K6 752 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 FAM171A1Q5VUB5 890 aa7.7□□□□□ -1.18
SCAMP1-206ENST00000618166 PEAR1Q5VY43 1037 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms