RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 POC1B-GALNT4F8VUJ3 575 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 MAFGO15525 162 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 DPEP1P16444 411 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 FOXN2P32314 431 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 NOP14P78316 857 aaKnown RBP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 SP2Q02086 613 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 ZNF394Q53GI3 561 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 CGB2Q6NT52 195 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 FAM47EQ6ZV65 393 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 BBOF1Q8ND07 529 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 ASAP3Q8TDY4 903 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 RMDN2Q96LZ7 410 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 PARVAQ9NVD7 372 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 LGALS13Q9UHV8 139 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 LOC102724159A0A0B4J2E5 919 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 EXOC1LA0A1B0GW35 172 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 F8VP50 259 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 LIASO43766 372 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 EZRP15311 586 aaKnown RBP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 NQO1P15559 274 aaKnown RBP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 ATP4AP20648 1035 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 SLC8A1P32418 973 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 ARSEP51690 589 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 NEDD9Q14511 834 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 STAT4Q14765 748 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 PWP2Q15269 919 aaKnown RBP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 XKR3Q5GH77 459 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 MFSD7Q6UXD7 560 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 PHF13Q86YI8 300 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 ZCCHC9Q8N567 271 aaKnown RBP12.49□□□□□ -0.41
C11orf54-215ENST00000617482 DEPTORQ8TB45 409 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 MAGEC3Q8TD91 643 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 ZNF606Q8WXB4 792 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 VCPIP1Q96JH7 1222 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 MAGEB18Q96M61 343 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 MCM8Q9UJA3 840 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 TRIM33Q9UPN9 1127 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 SCINQ9Y6U3 715 aa12.49□□□□□ -0.41
C11orf54-215ENST00000617482 CFAP73A6NFT4 308 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 H0YCG3 227 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 CST3P01034 146 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-215ENST00000617482 KRT1P04264 644 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 EDN1P05305 212 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 TAC1P20366 129 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 GLRA2P23416 452 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 COPS2P61201 443 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 BNIP1Q12981 228 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 GPS1Q13098 491 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 NCOA4Q13772 614 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 TXNRD3NBQ6F5E7 133 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 ANKRD35Q8N283 1001 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 GIMAP7Q8NHV1 300 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 MAML1Q92585 1016 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 KLHL29Q96CT2 875 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 MCEEQ96PE7 176 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 KIF9Q9HAQ2 790 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 IP6K2Q9UHH9 426 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 STK38LQ9Y2H1 464 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 L3MBTL1Q9Y468 752 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 PECAM1P16284 738 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-215ENST00000617482 CETN2P41208 172 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 ALDH5A1P51649 535 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-215ENST00000617482 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
C11orf54-215ENST00000617482 PLCB3Q01970 1234 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
C11orf54-215ENST00000617482 ENPEPQ07075 957 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 MGAT5Q09328 741 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 NBPF12Q5TAG4 269 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-215ENST00000617482 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 RCOR2Q8IZ40 523 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 SLITRK1Q96PX8 696 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 GEMIN8Q9NWZ8 242 aaKnown RBP12.48□□□□□ -0.41
C11orf54-215ENST00000617482 KLHL14Q9P2G3 628 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
C11orf54-215ENST00000617482 FAM47DPA6NHR8 397 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 TTLL13PA6NNM8 815 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 TJP3O95049 919 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 IFNB1P01574 187 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 KCNA3P22001 575 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 GCAP28676 217 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 PSMC4P43686 418 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 HMGCS2P54868 508 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 BACE1P56817 501 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 FSTL1Q12841 308 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 SUPT20HL1Q3ZLR7 823 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 ACCSLQ4AC99 568 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 PPP1R21Q6ZMI0 780 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 RELL1Q8IUW5 271 aa12.47□□□□□ -0.41
C11orf54-215ENST00000617482 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms