RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 DEFA3P59666 94 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 KRR1Q13601 381 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 PKN3Q6P5Z2 889 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SRLQ86TD4 932 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SAMD3Q8N6K7 520 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 SLC44A5Q8NCS7 719 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 HIST1H2AHQ96KK5 128 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 XPO6Q96QU8 1125 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 HIST1H2AJQ99878 128 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 CNPY3Q9BT09 278 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 H2AFJQ9BTM1 129 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 TEX13BQ9BXU2 312 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ADNPQ9H2P0 1102 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ANKEF1Q9NU02 776 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 MYH8P13535 1937 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 PP2D1A8MPX8 630 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 C21orf2O43822 256 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 GH1P01241 217 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RPLP2P05387 115 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 SLC2A3P11169 496 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 PCSK1P29120 753 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 MMP14P50281 582 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 DSG1Q02413 1049 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 HORMAD1Q86X24 394 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ANKMY2Q8IV38 441 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RNF149Q8NC42 400 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 RBBP8NLQ8NC74 664 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 CYGBQ8WWM9 190 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ABHD8Q96I13 439 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 C17orf80Q9BSJ5 609 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 NT5C1AQ9BXI3 368 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 KCNF1Q9H3M0 494 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 TDRD3Q9H7E2 651 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 NYAP2Q9P242 653 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 TUBE1Q9UJT0 475 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ZC3H4Q9UPT8 1303 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 IQCA1LA6NCM1 817 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 GPD1P21695 349 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 WLSQ5T9L3 541 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 CCNI2Q6ZMN8 369 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 JAMLQ86YT9 394 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 TFB1MQ8WVM0 346 aaKnown RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 CCDC126Q96EE4 140 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 MS4A14Q96JA4 679 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 FAM84BQ96KN1 310 aaPredicted RBP4.78□□□□□ -1.64
CHD9-221ENST00000615216 GOLPH3Q9H4A6 298 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 MANSC1Q9H8J5 431 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 CNTNAP5Q8WYK1 1306 aa4.78□□□□□ -1.64
CHD9-221ENST00000615216 ENTPD3O75355 529 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 DAB1O75553 588 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 CPB1P15086 417 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 MTMR2Q13614 643 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 MAPRE1Q15691 268 aaKnown RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 EFHC1Q5JVL4 640 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 PID1Q7Z2X4 250 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 ANKRD27Q96NW4 1050 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 RIT2Q99578 217 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 SPATA16Q9BXB7 569 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 YIPF3Q9GZM5 350 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 GJB4Q9NTQ9 266 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 GIMAP4Q9NUV9 329 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 KRT87PA6NCN2 255 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 CCT8L1PA6NM43 557 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 CNTFP26441 200 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 CARSP49589 748 aaKnown RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 PSMD7P51665 324 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 GALCP54803 685 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 NPEPPSP55786 919 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 LRRC14Q15048 493 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 SNX31Q8N9S9 440 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 USP38Q8NB14 1042 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 SPATA18Q8TC71 538 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 CYFIP2Q96F07 1278 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 NR1H4Q96RI1 486 aaPredicted RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 PARK7Q99497 189 aaKnown RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 PALMDQ9NP74 551 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 NMRK1Q9NWW6 199 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 POLIQ9UNA4 740 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 SATB2Q9UPW6 733 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 DLG5Q8TDM6 1919 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 ADGRA3Q8IWK6 1321 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 FAM107AO95990 144 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 AKR1B1P15121 316 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 CACNB3P54284 484 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 DAB2P98082 770 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 NFX1Q12986 1120 aaKnown RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 CPA5Q8WXQ8 436 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 NSL1Q96IY1 281 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 MAGEB18Q96M61 343 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 ERGIC2Q96RQ1 377 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 NIF3L1Q9GZT8 377 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 PCMTD2Q9NV79 361 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 PRMT7Q9NVM4 692 aaPredicted RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 PDP2Q9P2J9 529 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 DCDC2Q9UHG0 476 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 APPL1Q9UKG1 709 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 MYH10P35580 1976 aa4.77□□□□□ -1.65
CHD9-221ENST00000615216 CEP170BQ9Y4F5 1589 aaPredicted RBP4.77□□□□□ -1.65
CHD9-221ENST00000615216 KCNA3P22001 575 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms