RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 PLEKHO1Q53GL0 409 aaPredicted RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 KRBOX4Q5JUW0 171 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 SNAP47Q5SQN1 464 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 NBPF12Q5TAG4 269 aaPredicted RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 CYP4A22Q5TCH4 519 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 CTRB2Q6GPI1 263 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 GRAMD4Q6IC98 578 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 FAM173BQ6P4H8 233 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 SLC4A10Q6U841 1118 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 BZW1Q7L1Q6 419 aaKnown RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 KRT28Q7Z3Y7 464 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 SLC51BQ86UW2 128 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 VPS36Q86VN1 386 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 PCSK9Q8NBP7 692 aaKnown RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 ATL1Q8WXF7 558 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 CASP10Q92851 521 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 VPS50Q96JG6 964 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 CCDC42Q96M95 316 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 TRAPPC9Q96Q05 1148 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 TTC1Q99614 292 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 COQ7Q99807 217 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 HAUS8Q9BT25 410 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 LRRC3Q9BY71 257 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 SIL1Q9H173 461 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 MROH8Q9H579 483 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 ELAC1Q9H777 363 aaKnown RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 CNTD2Q9H8S5 307 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 ZCCHC17Q9NP64 241 aaKnown RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 KLC4Q9NSK0 619 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 ZNF624Q9P2J8 865 aaPredicted RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 ARHGAP28Q9P2N2 729 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 PPARGC1AQ9UBK2 798 aaKnown RBP6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 ZMYM5Q9UJ78 669 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 SLC4A7Q9Y6M7 1214 aa6.24□□□□□ -1.41
LSM1P2-201ENST00000604911 BAZ1AQ9NRL2 1556 aaPredicted RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 ABCC11Q96J66 1382 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 MACROD2A1Z1Q3 448 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 OR5K4A6NMS3 321 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 N4BP3O15049 544 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 XPOTO43592 962 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 ITGB3P05106 788 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 MTHFD1P11586 935 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 PTPN2P17706 415 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 NFKBIAP25963 317 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 EVI2BP34910 448 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 ETFBP38117 255 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 LIFRP42702 1097 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 RXRGP48443 463 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 PCBP3P57721 371 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 RPP38P78345 283 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 KLC1Q07866 573 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 BLMHQ13867 455 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 IDI1Q13907 227 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 CYLC2Q14093 348 aaPredicted RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 E2F2Q14209 437 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 WSCD2Q2TBF2 565 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 LETM2Q2VYF4 491 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 Q3ZCU0 254 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 FUT11Q495W5 492 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 ARSHQ5FYA8 562 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 INTS11Q5TA45 600 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 SNX30Q5VWJ9 437 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 IL23RQ5VWK5 629 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 KLC3Q6P597 504 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 RHOUQ7L0Q8 258 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 BNIPLQ7Z465 357 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 METTL16Q86W50 562 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 RHOT2Q8IXI1 618 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 TAB3Q8N5C8 712 aaPredicted RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 FBXO30Q8TB52 745 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 CAGE1Q8TC20 777 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 GFM2Q969S9 779 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 CHFRQ96EP1 664 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 FAM167AQ96KS9 214 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 SPATA17Q96L03 361 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 CCDC138Q96M89 665 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 SECISBP2Q96T21 854 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 RIOK1Q9BRS2 568 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 KATNAL1Q9BW62 490 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 SLC13A1Q9BZW2 595 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 B3GNT4Q9C0J1 378 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 YIPF3Q9GZM5 350 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 DCTPP1Q9H773 170 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 PREBQ9HCU5 417 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 ZNF277Q9NRM2 450 aaPredicted RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 SDHAF3Q9NRP4 125 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 RASSF1Q9NS23 344 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 FARSBQ9NSD9 589 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 GMIPQ9P107 970 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 MYO1AQ9UBC5 1043 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 DDX20Q9UHI6 824 aaKnown RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 TEKT2Q9UIF3 430 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 DDX19BQ9UMR2 479 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 JAG2Q9Y219 1238 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 IRAK3Q9Y616 596 aa6.23□□□□□ -1.41
LSM1P2-201ENST00000604911 ROBO2Q9HCK4 1378 aa6.22□□□□□ -1.41
LSM1P2-201ENST00000604911 ABCC9O60706 1549 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms