RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TNPO2O14787 897 aaKnown RBP11.05□□□□□ -0.64
VPS25-203ENST00000589520 RAD51CO43502 376 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 DUSP11O75319 330 aaKnown RBP11.05□□□□□ -0.64
VPS25-203ENST00000589520 GPR32O75388 356 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 PROSCO94903 275 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 GJB1P08034 283 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 GLI1P08151 1106 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 KRT19P08727 400 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 SMIM10L2AP0DMW4 78 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 SMIM10L2BP0DMW5 78 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 CXCL8P10145 99 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 HSPA8P11142 646 aaKnown RBP11.05□□□□□ -0.64
VPS25-203ENST00000589520 CYP2C9P11712 490 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 AKR1A1P14550 325 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 ATF7P17544 494 aaPredicted RBP11.05□□□□□ -0.64
VPS25-203ENST00000589520 RRM1P23921 792 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 ASPAP45381 313 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 GSCP56915 257 aaPredicted RBP11.05□□□□□ -0.64
VPS25-203ENST00000589520 SNX16P57768 344 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 RNASE9P60153 205 aaKnown RBP11.05□□□□□ -0.64
VPS25-203ENST00000589520 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 SLC10A6Q3KNW5 377 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 SPDYCQ5MJ68 293 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 LRRC38Q5VT99 294 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 TAF2Q6P1X5 1199 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 CATSPER4Q7RTX7 472 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 RHOT1Q8IXI2 618 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 HDAC7Q8WUI4 952 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 CPA5Q8WXQ8 436 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 SETD4Q9NVD3 440 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
VPS25-203ENST00000589520 SMARCAL1Q9NZC9 954 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 PARP2Q9UGN5 583 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 PCYOX1Q9UHG3 505 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 HPCAL4Q9UM19 191 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
VPS25-203ENST00000589520 C17orf102A2RUQ5 167 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 FSCN2O14926 492 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
VPS25-203ENST00000589520 CA12O43570 354 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 HSF2BPO75031 334 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 PHF2O75151 1096 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 FAM163BP0C2L3 166 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 VDRP11473 427 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 DARSP14868 501 aaKnown RBP11.04□□□□□ -0.64
VPS25-203ENST00000589520 FNTAP49354 379 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 FCGRTP55899 365 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 OSTNP61366 133 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 NKX3-2P78367 333 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 ADAM17P78536 824 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 SLC7A5Q01650 507 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 MAMLD1Q13495 774 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 PIGHQ14442 188 aaPredicted RBP11.04□□□□□ -0.64
VPS25-203ENST00000589520 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 MFSD14CQ5VZR4 134 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 SYDE1Q6ZW31 735 aaPredicted RBP11.04□□□□□ -0.64
VPS25-203ENST00000589520 SND1Q7KZF4 910 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS25-203ENST00000589520 ERICH1Q86X53 443 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 SLC13A5Q86YT5 568 aaPredicted RBP11.04□□□□□ -0.64
VPS25-203ENST00000589520 C1orf127Q8N9H9 656 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 C12orf50Q8NA57 414 aaPredicted RBP11.04□□□□□ -0.64
VPS25-203ENST00000589520 BEST2Q8NFU1 509 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 ALG3Q92685 438 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 KAT2BQ92831 832 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 DPP3Q9NY33 737 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
VPS25-203ENST00000589520 BARX2Q9UMQ3 279 aaPredicted RBP11.04□□□□□ -0.64
VPS25-203ENST00000589520 A6NNZ2 444 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 TMEM110-MUSTN1A8MSY1 372 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 ZMYND10O75800 440 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 CD4P01730 458 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 HMGCRP04035 888 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 ITGB3P05106 788 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 NFICP08651 508 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 CYP2B6P20813 491 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 CYP3A5P20815 502 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 OAS2P29728 719 aaKnown RBP11.03□□□□□ -0.64
VPS25-203ENST00000589520 CRYBB1P53674 252 aaPredicted RBP11.03□□□□□ -0.64
VPS25-203ENST00000589520 COPS2P61201 443 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 DR1Q01658 176 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 MTMR3Q13615 1198 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 ZNF268Q14587 947 aaPredicted RBP11.03□□□□□ -0.64
VPS25-203ENST00000589520 ACAP1Q15027 740 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 CNGA2Q16280 664 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 TUBB8Q3ZCM7 444 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 DCAF12L1Q5VU92 463 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 RCOR2Q8IZ40 523 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 CEP120Q8N960 986 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 C3orf20Q8ND61 904 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
VPS25-203ENST00000589520 CXorf38Q8TB03 319 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 IFT81Q8WYA0 676 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 SLCO2A1Q92959 643 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 HPDLQ96IR7 371 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms