RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FAXDC2Q96IV6 333 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 SCLT1Q96NL6 688 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 ZNF518BQ9C0D4 1074 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 NXF1Q9UBU9 619 aaKnown RBP19.28■□□□□ 0.68
SMPD3-211ENST00000568373 RASAL2Q9UJF2 1139 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 POLIQ9UNA4 740 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMPD3-211ENST00000568373 TSPAN1O60635 241 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 RARAP10276 462 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 ZNF667Q5HYK9 610 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 TTC27Q6P3X3 843 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 ZNF410Q86VK4 478 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 TMEM35BQ8NCS4 154 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 RUNDC3BQ96NL0 473 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 BCO2Q9BYV7 579 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 TRIM31Q9BZY9 425 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 PCDHGC3Q9UN70 934 aa19.28■□□□□ 0.68
SMPD3-211ENST00000568373 GOLGA6CA6NDK9 693 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 FSCN2O14926 492 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 ERLIN2O94905 339 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 CALB1P05937 261 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 GOLGA6DP0CG33 693 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 CCDC137Q6PK04 289 aaKnown RBP19.27■□□□□ 0.68
SMPD3-211ENST00000568373 C12orf50Q8NA57 414 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-211ENST00000568373 C1orf131Q8NDD1 294 aaKnown RBP19.27■□□□□ 0.68
SMPD3-211ENST00000568373 TFAP2BQ92481 460 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 DDX27Q96GQ7 796 aaKnown RBP19.27■□□□□ 0.68
SMPD3-211ENST00000568373 GOLGA6AQ9NYA3 693 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 CPA4Q9UI42 421 aa19.27■□□□□ 0.68
SMPD3-211ENST00000568373 TLR3O15455 904 aaKnown RBP19.26■□□□□ 0.67
SMPD3-211ENST00000568373 PSTPIP1O43586 416 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 ITGB3P05106 788 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 EIF4BP23588 611 aaKnown RBP19.26■□□□□ 0.67
SMPD3-211ENST00000568373 CDH5P33151 784 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-211ENST00000568373 LMAN1P49257 510 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 DRG2P55039 364 aaKnown RBP19.26■□□□□ 0.67
SMPD3-211ENST00000568373 SLC10A6Q3KNW5 377 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 WDR72Q3MJ13 1102 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 CD302Q8IX05 232 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 CXorf38Q8TB03 319 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 FEZF2Q8TBJ5 459 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 DOCK3Q8IZD9 2030 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 A0A1B0GUA9 196 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 PODXLO00592 558 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 MAN1A1P33908 653 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 COILP38432 576 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-211ENST00000568373 FNTAP49354 379 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 LACTBP83111 547 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-211ENST00000568373 CST9Q5W186 159 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 SETD4Q9NVD3 440 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 CEP83Q9Y592 693 aa19.26■□□□□ 0.67
SMPD3-211ENST00000568373 RRN3P2A6NIE6 340 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 KRT14P02533 472 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 ATICP31939 592 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 FLT3P36888 993 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 HSD17B3P37058 310 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 RAP1GAPP47736 663 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 MORN1Q5T089 497 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 DAB2IPQ5VWQ8 1189 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 RHOT1Q8IXI2 618 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 FMO2Q99518 471 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 ADPGKQ9BRR6 497 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 ZMYND15Q9H091 742 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 LRRC19Q9H756 370 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 VRTNQ9H8Y1 702 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 IP6K2Q9UHH9 426 aa19.25■□□□□ 0.67
SMPD3-211ENST00000568373 A6NJR5 290 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 GJB6O95452 261 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 MAP2K5Q13163 448 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 IRF5Q13568 498 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 TMEM132DQ14C87 1099 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 UAP1Q16222 522 aaPredicted RBP19.24■□□□□ 0.67
SMPD3-211ENST00000568373 TMC3Q7Z5M5 1100 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 TMEM130Q8N3G9 435 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 WDTC1Q8N5D0 677 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 FAM76AQ8TAV0 307 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 ARL8AQ96BM9 186 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 ACAP3Q96P50 834 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 GPBP1L1Q9HC44 474 aaPredicted RBP19.24■□□□□ 0.67
SMPD3-211ENST00000568373 ZDHHC18Q9NUE0 388 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 CITO14578 2027 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 TCRBV5S1A1TA0A578 114 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 TMEM191CA6NGB0 347 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 DYNC1LI2O43237 492 aaPredicted RBP19.24■□□□□ 0.67
SMPD3-211ENST00000568373 HUNKP57058 714 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 TAS2R40P59535 323 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 RPL7AP62424 266 aaKnown RBP19.24■□□□□ 0.67
SMPD3-211ENST00000568373 MTMR3Q13615 1198 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 TTMPQ5BVD1 217 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 PRAMEF19Q5SWL8 479 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 CCDC105Q8IYK2 499 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 MAIP1Q8WWC4 291 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 SDCBP2Q9H190 292 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 GNEQ9Y223 722 aaKnown RBP19.24■□□□□ 0.67
SMPD3-211ENST00000568373 PLAAQ9Y263 795 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 C2CD2Q9Y426 696 aa19.24■□□□□ 0.67
SMPD3-211ENST00000568373 F2P00734 622 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 PAEPP09466 180 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 CD19P15391 556 aa19.23■□□□□ 0.67
SMPD3-211ENST00000568373 RAD23BP54727 409 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms