RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 CXorf38Q8TB03 319 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 PARD3BQ8TEW8 1205 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 TMEM174Q8WUU8 243 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 ZNF516Q92618 1163 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 HPDLQ96IR7 371 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 UHRF1Q96T88 793 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 MMRN2Q9H8L6 949 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 KIAA1468Q9P260 1216 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 DPP7Q9UHL4 492 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 CCDC195A0A1B0GUA6 201 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 ARHGEF37A1IGU5 675 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 WDR27A2RRH5 827 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 CETN3O15182 167 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 KRT13P13646 458 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 TYMPP19971 482 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 SP100P23497 879 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 PAX3P23760 479 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 CDR1P51861 262 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 ITIH3Q06033 890 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 TRPC3Q13507 836 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 WSCD1Q658N2 575 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 CENPPQ6IPU0 288 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 SLC8B1Q6J4K2 584 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 SLC7A14Q8TBB6 771 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 NELFBQ8WX92 580 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 PLEKHA4Q9H4M7 779 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 DSEQ9UL01 958 aa17.06■□□□□ 0.32
RABGGTA-206ENST00000558649 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 TBC1D4O60343 1298 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 HUS1O60921 280 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 OAZ2O95190 189 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 C8AP07357 584 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 EPB41P11171 864 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 CCNE1P24864 410 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 VAMP7P51809 220 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 STX17P56962 302 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 LRRC63Q05C16 580 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 CBX2Q14781 532 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 PPM1LQ5SGD2 360 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 TDRD10Q5VZ19 366 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 INTS8Q75QN2 995 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 GPT2Q8TD30 523 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 TMC2Q8TDI7 906 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 BORCS6Q96GS4 357 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 RIPOR3Q96MK2 946 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 PGLYRP2Q96PD5 576 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 TMEM209Q96SK2 561 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 COL25A1Q9BXS0 654 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 L1RE1Q9UN81 338 aa17.05■□□□□ 0.32
RABGGTA-206ENST00000558649 PRRG1O14668 218 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 MAPK13O15264 365 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 CST3P01034 146 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 CYP11A1P05108 521 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 ELF1P32519 619 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 SSTR3P32745 418 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 PPP1R2P41236 205 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 RNF19BQ6ZMZ0 732 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 THEM5Q8N1Q8 247 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 PDCL2Q8N4E4 241 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 TRIML1Q8N9V2 468 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 ZNF461Q8TAF7 563 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 SUSD6Q92537 303 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 SMG7Q92540 1137 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 ELMO3Q96BJ8 720 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 POMKQ9H5K3 350 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 PIDD1Q9HB75 910 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 POLIQ9UNA4 740 aa17.04■□□□□ 0.32
RABGGTA-206ENST00000558649 DENND4AQ7Z401 1863 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 OR6C75A6NL08 312 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 CCL16O15467 120 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 ZMYND10O75800 440 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 PIK3CAP42336 1068 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 MTHFRP42898 656 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 GCLMP48507 274 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 AP3M2P53677 418 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 MYL6P60660 151 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 CLDN10P78369 228 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 FKBP3Q00688 224 aaKnown RBP17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 PAK1Q13153 545 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 DCAF17Q5H9S7 520 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 ATAT1Q5SQI0 421 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 TCERG1LQ5VWI1 586 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 GPR149Q86SP6 731 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 ADGRF2Q8IZF7 708 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 OR10T2Q8NGX3 314 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 RPGRIP1Q96KN7 1286 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 GDAP2Q9NXN4 497 aa17.03■□□□□ 0.32
RABGGTA-206ENST00000558649 BICDL2A1A5D9 508 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms