RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ZC3H11AO75152 810 aaKnown RBP eCLIP10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 CXCL14O95715 111 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 GLP2RO95838 553 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 CYP11B2P19099 503 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 PBX3P40426 434 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 PRPHP41219 470 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 PLAURQ03405 335 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 CLUL1Q15846 466 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 LONRF3Q496Y0 759 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 PLPP4Q5VZY2 271 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 SPATC1Q76KD6 591 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 DDX53Q86TM3 631 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 SMRP1Q8NCR6 262 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 SMG8Q8ND04 991 aaKnown RBP10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 IGSF21Q96ID5 467 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 FAM193BQ96PV7 902 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 POLR3FQ9H1D9 316 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 C2orf40Q9H1Z8 148 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 PRMT7Q9NVM4 692 aaPredicted RBP10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 PFDN2Q9UHV9 154 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 GIT1Q9Y2X7 761 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 DYRK1BQ9Y463 629 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 IPPQ9Y573 584 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 IRAK3Q9Y616 596 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 BRWD1Q9NSI6 2320 aa10.83□□□□□ -0.68
HNRNPC-228ENST00000557033 C2orf71A6NGG8 1288 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 HIDE1A8MVS5 230 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 DDHD2O94830 711 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 MAP3K6O95382 1288 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 ASMTLO95671 621 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 FAM157BP0CG42 384 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 CTSAP10619 480 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 HOXB8P17481 243 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 ARF4P18085 180 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 CCT6AP40227 531 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 PPP2R5AQ15172 486 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 PPP2R5EQ16537 467 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 FAM187BQ17R55 369 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 SLC27A1Q6PCB7 646 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 MAEAQ7L5Y9 396 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 ZNF280BQ86YH2 543 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 FMNL3Q8IVF7 1028 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 ZBTB8OSQ8IWT0 167 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 VPS52Q8N1B4 723 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 IGSF22Q8N9C0 903 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 CASP10Q92851 521 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 TBC1D32Q96NH3 1257 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 TRIM6Q9C030 488 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 FZD8Q9H461 694 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 ZMYM5Q9UJ78 669 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 BARX2Q9UMQ3 279 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 PCDHB6Q9Y5E3 794 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 BDP1A6H8Y1 2624 aa10.82□□□□□ -0.68
HNRNPC-228ENST00000557033 ARL5CA6NH57 179 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 LRRIQ4A6NIV6 560 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 H3BQV1 296 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 POMCP01189 267 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 NFKB1P19838 968 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 GJB2P29033 226 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 NAMPTP43490 491 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 SLC11A1P49279 550 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 AFF1P51825 1210 aaKnown RBP10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 TMEM31Q5JXX7 168 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 KRT79Q5XKE5 535 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 CDCA2Q69YH5 1023 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 MCTP1Q6DN14 999 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 ANKRD54Q6NXT1 300 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 ST13P5Q8NFI4 369 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 VN1R2Q8NFZ6 395 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 ZNF669Q96BR6 464 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 CPB2Q96IY4 423 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 PNMA5Q96PV4 448 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 EIF2AQ9BY44 585 aaKnown RBP10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 ZBP1Q9H171 429 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 S1PR5Q9H228 398 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 GPRC5CQ9NQ84 441 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 DNAJB4Q9UDY4 337 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 DNM3Q9UQ16 869 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 SSX2IPQ9Y2D8 614 aa10.81□□□□□ -0.68
HNRNPC-228ENST00000557033 ZMYM2Q9UBW7 1377 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 PDE2AO00408 941 aaPredicted RBP10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 ACKR2O00590 384 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 NRP1O14786 923 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 ATXN7O15265 892 aaPredicted RBP10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 DCXO43602 365 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 CLASP2O75122 1294 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 EFNA5P52803 228 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 PPP2R3AQ06190 1150 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 MAPK6Q16659 721 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 EFHC2Q5JST6 749 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 SYCE2Q6PIF2 218 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 PPFIBP1Q86W92 1011 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 COLGALT2Q8IYK4 626 aa10.8□□□□□ -0.68
HNRNPC-228ENST00000557033 C19orf47Q8N9M1 422 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms