RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SOX9P48436 509 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ACOT2P49753 483 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 WNT7BP56706 349 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 LILRA4P59901 499 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 PPP2R3AQ06190 1150 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 GPR17Q13304 367 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ZNF528Q3MIS6 628 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 SPATA1Q5VX52 437 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 IQCEQ6IPM2 695 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 CENPPQ6IPU0 288 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 DSTYKQ6XUX3 929 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 GAREM2Q75VX8 874 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ZBTB44Q8NCP5 570 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 OR10T2Q8NGX3 314 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 RUBCNQ92622 972 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 RAD54LQ92698 747 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 KCNN1Q92952 543 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 EPSTI1Q96J88 318 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ZFYVE19Q96K21 471 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 SENP8Q96LD8 212 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 HINFPQ9BQA5 517 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ZHX3Q9H4I2 956 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 RPF1Q9H9Y2 349 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 C2orf42Q9NWW7 574 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 KCND2Q9NZV8 630 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 FBXO4Q9UKT5 387 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 MTMR11A4FU01 709 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 PIRO00625 290 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 TRAK2O60296 914 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 LILRB5O75023 590 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 FAM13AO94988 1023 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 CYP3A5P20815 502 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 UBA7P41226 1012 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 RPS9P46781 194 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 KCNA1Q09470 495 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 C9orf57Q5W0N0 161 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 OVOS1Q6IE37 1185 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 FAM173BQ6P4H8 233 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 ZC3H14Q6PJT7 736 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 CRELD2Q6UXH1 353 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 LRRTM3Q86VH5 581 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 TTC8Q8TAM2 541 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 DNASE1L2Q92874 299 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 NELL2Q99435 816 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 LPIN3Q9BQK8 851 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 MSTO1Q9BUK6 570 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 LMAN1LQ9HAT1 526 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 TRPV4Q9HBA0 871 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 PARVGQ9HBI0 331 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 PRMT8Q9NR22 394 aaPredicted RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 SMC3Q9UQE7 1217 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 CLIC4Q9Y696 253 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 PIAS3Q9Y6X2 628 aa12.54□□□□□ -0.4
PRPF40B-212ENST00000551111 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 SLC38A8A6NNN8 435 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 CHRNB1P11230 501 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 TGM1P22735 817 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 CCNE1P24864 410 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 GTF2BQ00403 316 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 DMWDQ09019 674 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 TXNDC11Q6PKC3 985 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 DYMQ7RTS9 669 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 ERMP1Q7Z2K6 904 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 DNAJB7Q7Z6W7 309 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 USP37Q86T82 979 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 ARID3BQ8IVW6 561 aaPredicted RBP12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 MFSD6LQ8IWD5 586 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 STKLD1Q8NE28 680 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 FAM3CQ92520 227 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 IRF7Q92985 503 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 CALML4Q96GE6 196 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 BORCS6Q96GS4 357 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 AK8Q96MA6 479 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 CHRDQ9H2X0 955 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
PRPF40B-212ENST00000551111 OR6C75A6NL08 312 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 ZNF263O14978 683 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 PRAMEF12O95522 483 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 ATF6P18850 670 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 TYMPP19971 482 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 ADSSP30520 456 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 SATB1Q01826 763 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 PTPAQ15257 358 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 LPAL2Q16609 132 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 SLC39A12Q504Y0 691 aa12.52□□□□□ -0.41
PRPF40B-212ENST00000551111 SFR1Q86XK3 245 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms