RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 TOGARAM2Q6ZUX3 1019 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 FAM71AQ8IYT1 594 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 BEST2Q8NFU1 509 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 TRIM43Q96BQ3 446 aaPredicted RBP8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 PPP1R10Q96QC0 940 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 GAD1Q99259 594 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 SYT11Q9BT88 431 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 SDCBP2Q9H190 292 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 VRTNQ9H8Y1 702 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 GOLGA2P5Q9HBQ8 144 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 DPP3Q9NY33 737 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 CACNG4Q9UBN1 327 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 ITGA11Q9UKX5 1188 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 UBQLN1Q9UMX0 589 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 POLIQ9UNA4 740 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 AGAP1Q9UPQ3 857 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 GIT1Q9Y2X7 761 aa8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 REXO2Q9Y3B8 237 aaKnown RBP8.69□□□□□ -1.02
DEPDC4-207ENST00000549249 A0A0U1RQJ8 604 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 A0A1W2PPC1 479 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SSU72P8A0A1W2PR75 194 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ARL5CA6NH57 179 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 USP27XA6NNY8 438 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF263O14978 683 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 INPPL1O15357 1258 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 CALCAP01258 141 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SERPING1P05155 500 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 KRT19P08727 400 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 FERP16591 822 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 IBSPP21815 317 aaPredicted RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 LRPAP1P30533 357 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ASPAP45381 313 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SCNN1GP51170 649 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ARID5AQ03989 594 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 PTK2Q05397 1052 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 KLHL30Q0D2K2 578 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 TRPC3Q13507 836 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 CUL2Q13617 745 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SGSM1Q2NKQ1 1148 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 TDRD12Q587J7 1177 aaKnown RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 CLLU1OSQ5K130 101 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 C9orf57Q5W0N0 161 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SCARA5Q6ZMJ2 495 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ENOSF1Q7L5Y1 443 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF571Q7Z3V5 609 aaPredicted RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 RNF169Q8NCN4 708 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ACRBPQ8NEB7 543 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ATRIPQ8WXE1 791 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SEPT8Q92599 483 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 TAF4BQ92750 862 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 TSPAN18Q96SJ8 248 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 BCO2Q9BYV7 579 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 NIF3L1Q9GZT8 377 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 HAUS4Q9H6D7 363 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SMYD3Q9H7B4 428 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 NHEJ1Q9H9Q4 299 aaPredicted RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 RSAD1Q9HA92 442 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 SPTLC3Q9NUV7 552 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 TMEM39AQ9NV64 488 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNHIT6Q9NWK9 470 aaKnown RBP8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 MYH10P35580 1976 aa8.68□□□□□ -1.02
DEPDC4-207ENST00000549249 VWA8A3KMH1 1905 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 PIRO00625 290 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 ENPP3O14638 875 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 KIAA0355O15063 1070 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 SPTLC1O15269 473 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 CYP26A1O43174 497 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 NRDCO43847 1150 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 OFD1O75665 1012 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 NDUFA10O95299 355 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 PARNO95453 639 aaKnown RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 FGFR1P11362 822 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 SKIP12755 728 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 CYP3A5P20815 502 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 TBXAS1P24557 533 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 IGFBP6P24592 240 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 ATICP31939 592 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 RAP1GAPP47736 663 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 KIF11P52732 1056 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 RBP5P82980 135 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 ZNF667Q5HYK9 610 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 SLC24A5Q71RS6 500 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 DEFB128Q7Z7B8 93 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 REXO1L1PQ8IX06 675 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 HACE1Q8IYU2 909 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 CCAR2Q8N163 923 aaKnown RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 CRIPAKQ8N1N5 446 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 LRRC52Q8N7C0 313 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 LNX1Q8TBB1 728 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 SLC20A1Q8WUM9 679 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 APBB2Q92870 758 aa8.67□□□□□ -1.02
DEPDC4-207ENST00000549249 HPDLQ96IR7 371 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms