RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
GNE-204ENST00000539208 TNFSF13BQ9Y275 285 aa19.02■□□□□ 0.64
GNE-204ENST00000539208 ASB14A6NK59 587 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 EIF4BP23588 611 aaKnown RBP19.02■□□□□ 0.63
GNE-204ENST00000539208 SSTR3P32745 418 aaPredicted RBP19.02■□□□□ 0.63
GNE-204ENST00000539208 YWHAEP62258 255 aaKnown RBP19.02■□□□□ 0.63
GNE-204ENST00000539208 TAP1Q03518 808 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 SNX1Q13596 522 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 LRRC38Q5VT99 294 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 MOB2Q70IA6 237 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 NLRP14Q86W24 1093 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 OPTNQ96CV9 577 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 FAM212AQ96EL1 285 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 OSBPL8Q9BZF1 889 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 NEU2Q9Y3R4 380 aa19.02■□□□□ 0.63
GNE-204ENST00000539208 DCDC2CA8MYV0 355 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 IL18RAPO95256 599 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 FAM107AO95990 144 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 TNNC2P02585 160 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 CETN2P41208 172 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 CDR1P51861 262 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 TFAMQ00059 246 aaKnown RBP19.01■□□□□ 0.63
GNE-204ENST00000539208 MBTD1Q05BQ5 628 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 EFCAB12Q6NXP0 572 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 USP50Q70EL3 339 aaPredicted RBP19.01■□□□□ 0.63
GNE-204ENST00000539208 CCDC50Q8IVM0 306 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 RCOR2Q8IZ40 523 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 ATG4AQ8WYN0 398 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 ANKRD36BP1Q96IX9 119 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 CCT8L2Q96SF2 557 aa19.01■□□□□ 0.63
GNE-204ENST00000539208 O00370 1275 aa19■□□□□ 0.63
GNE-204ENST00000539208 ASPAP45381 313 aa19■□□□□ 0.63
GNE-204ENST00000539208 TTLL12Q14166 644 aaPredicted RBP19■□□□□ 0.63
GNE-204ENST00000539208 LLGL1Q15334 1064 aa19■□□□□ 0.63
GNE-204ENST00000539208 SKIDA1Q1XH10 827 aa19■□□□□ 0.63
GNE-204ENST00000539208 ZNF699Q32M78 642 aa19■□□□□ 0.63
GNE-204ENST00000539208 ZNF484Q5JVG2 852 aa19■□□□□ 0.63
GNE-204ENST00000539208 MYCBPAPQ8TBZ2 947 aa19■□□□□ 0.63
GNE-204ENST00000539208 TRAPPC12Q8WVT3 735 aa19■□□□□ 0.63
GNE-204ENST00000539208 COPS5Q92905 334 aa19■□□□□ 0.63
GNE-204ENST00000539208 CENPTQ96BT3 561 aa19■□□□□ 0.63
GNE-204ENST00000539208 ROPN1BQ9BZX4 212 aaPredicted RBP19■□□□□ 0.63
GNE-204ENST00000539208 RABEP2Q9H5N1 569 aa19■□□□□ 0.63
GNE-204ENST00000539208 ROPN1Q9HAT0 212 aaPredicted RBP19■□□□□ 0.63
GNE-204ENST00000539208 ERAP1Q9NZ08 941 aa19■□□□□ 0.63
GNE-204ENST00000539208 ASIC3Q9UHC3 531 aa19■□□□□ 0.63
GNE-204ENST00000539208 R3HDM2Q9Y2K5 976 aaKnown RBP19■□□□□ 0.63
GNE-204ENST00000539208 ATXN2Q99700 1313 aaKnown RBP19■□□□□ 0.63
GNE-204ENST00000539208 INO80B-WBP1J3KQ70 363 aa19■□□□□ 0.63
GNE-204ENST00000539208 TRAPPC3O43617 180 aa19■□□□□ 0.63
GNE-204ENST00000539208 CD58P19256 250 aa19■□□□□ 0.63
GNE-204ENST00000539208 FAM187BQ17R55 369 aa19■□□□□ 0.63
GNE-204ENST00000539208 PPP1R15BQ5SWA1 713 aa19■□□□□ 0.63
GNE-204ENST00000539208 DAB2IPQ5VWQ8 1189 aa19■□□□□ 0.63
GNE-204ENST00000539208 THNSL1Q8IYQ7 743 aa19■□□□□ 0.63
GNE-204ENST00000539208 ZNF473Q8WTR7 871 aaKnown RBP19■□□□□ 0.63
GNE-204ENST00000539208 RBM41Q96IZ5 413 aaKnown RBP19■□□□□ 0.63
GNE-204ENST00000539208 NLRP4Q96MN2 994 aa19■□□□□ 0.63
GNE-204ENST00000539208 INO80BQ9C086 356 aaPredicted RBP19■□□□□ 0.63
GNE-204ENST00000539208 GGA2Q9UJY4 613 aa19■□□□□ 0.63
GNE-204ENST00000539208 C22orf31O95567 290 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 AGTP01019 485 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 BRD2P25440 801 aaKnown RBP18.99■□□□□ 0.63
GNE-204ENST00000539208 RPL7AP62424 266 aaKnown RBP18.99■□□□□ 0.63
GNE-204ENST00000539208 TNFAIP8L3Q5GJ75 292 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 WDTC1Q8N5D0 677 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 BBOF1Q8ND07 529 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 HEMGNQ9BXL5 484 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 STMN4Q9H169 189 aaPredicted RBP18.99■□□□□ 0.63
GNE-204ENST00000539208 AAASQ9NRG9 546 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 PRMT7Q9NVM4 692 aaPredicted RBP18.99■□□□□ 0.63
GNE-204ENST00000539208 GMNCA6NCL1 334 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 B4GALT5O43286 388 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 FGFR4P22455 802 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 SEC24CP53992 1094 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 COPS2P61201 443 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 NFX1Q12986 1120 aaKnown RBP18.99■□□□□ 0.63
GNE-204ENST00000539208 EEF1DP3Q658K8 133 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 DNAJC24Q6P3W2 148 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 IFNLR1Q8IU57 520 aaPredicted RBP18.99■□□□□ 0.63
GNE-204ENST00000539208 NIPA2Q8N8Q9 360 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 GTF3C2Q8WUA4 911 aaPredicted RBP18.99■□□□□ 0.63
GNE-204ENST00000539208 TRAIPQ9BWF2 469 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 CDT1Q9H211 546 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 PDGFCQ9NRA1 345 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 USTQ9Y2C2 406 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 FAM169AQ9Y6X4 670 aa18.99■□□□□ 0.63
GNE-204ENST00000539208 ANK1P16157 1881 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 E7EVH7 732 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 RGS16O15492 202 aaPredicted RBP18.98■□□□□ 0.63
GNE-204ENST00000539208 WEE2P0C1S8 567 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 ATF2P15336 505 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 TMOD1P28289 359 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 PTPN7P35236 360 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 MMP13P45452 471 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 LMNB2Q03252 620 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 LAMC2Q13753 1193 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 PIGHQ14442 188 aaPredicted RBP18.98■□□□□ 0.63
GNE-204ENST00000539208 MFSD5Q6N075 450 aa18.98■□□□□ 0.63
GNE-204ENST00000539208 CCDC89Q8N998 374 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms