RNA–Protein interactions for RNA: ENST00000535728.5

SPOCK3-225, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-225ENST00000535728 CFAP36Q96G28 342 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 PAGE5Q96GU1 130 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 KCNK17Q96T54 332 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 ABCG4Q9H172 646 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 FANCEQ9HB96 536 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 USP29Q9HBJ7 922 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 SLC38A10Q9HBR0 1119 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 C8orf4Q9NR00 106 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 TCP11L1Q9NUJ3 509 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 KCTD5Q9NXV2 234 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 CLIC5Q9NZA1 410 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 GMIPQ9P107 970 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 VPS54Q9P1Q0 977 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 LIMA1Q9UHB6 759 aaKnown RBP5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 ERVK-11Q9UQG0 969 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 USP15Q9Y4E8 981 aaPredicted RBP5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 PCDHGA11Q9Y5H2 935 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 NFS1Q9Y697 457 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 SCN7AQ01118 1682 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 NHSQ6T4R5 1651 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 THSD7AQ9UPZ6 1657 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 ZNF532Q9HCE3 1301 aa5.08□□□□□ -1.6
SPOCK3-225ENST00000535728 TCRBV5S4A2TA0A5A2 114 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 ARHGAP10A1A4S6 786 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 MACROD2A1Z1Q3 448 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 CARNS1A5YM72 827 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 TRIM49BA6NDI0 452 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 FAM181BA6NEQ2 426 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 ZSCAN5CA6NGD5 496 aaPredicted RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 MOXD2PA6NHM9 499 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 B8ZZF3 427 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 BACH1O14867 736 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 RGS13O14921 159 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 YKT6O15498 198 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 DDHD2O94830 711 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 KLHL2O95198 593 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 GJB6O95452 261 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 AFPP02771 609 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 UQCRFS1P1P0C7P4 283 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 PDE6AP16499 860 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 CDH3P22223 829 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 PSMA3P25788 255 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 MAN1A1P33908 653 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 VPS41P49754 854 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 HNRNPFP52597 415 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 AP2B1P63010 937 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 KRT76Q01546 638 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SLC34A1Q06495 639 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 CETN1Q12798 172 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 TRAP1Q12931 704 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SP140Q13342 867 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 GIT2Q14161 759 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 MAPRE2Q15555 327 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 NPY5RQ15761 445 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 CCDC6Q16204 474 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 KCTD19Q17RG1 926 aaPredicted RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 TMEM266Q2M3C6 531 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 WDR72Q3MJ13 1102 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 HERC4Q5GLZ8 1057 aaPredicted RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 KIAA1841Q6NSI8 718 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 BORAQ6PGQ7 559 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 CORO6Q6QEF8 472 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 LRRC74BQ6ZQY2 392 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 TMTC3Q6ZXV5 915 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 USP43Q70EL4 1123 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 NET1Q7Z628 596 aaPredicted RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 NELFCDQ8IXH7 590 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 ANKRD53Q8N9V6 530 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 USP38Q8NB14 1042 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SPATA5Q8NB90 893 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SLC17A8Q8NDX2 589 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 PDZD8Q8NEN9 1154 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 EPS8L3Q8TE67 593 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 LRRC15Q8TF66 581 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 RMDN1Q96DB5 314 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SGF29Q96ES7 293 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 DNAJC7Q99615 494 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 DDX50Q9BQ39 737 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 ELAC2Q9BQ52 826 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 LPIN3Q9BQK8 851 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 GPATCH1Q9BRR8 931 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 PLVAPQ9BX97 442 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SLC26A6Q9BXS9 759 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 CALN1Q9BXU9 219 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 IMPG2Q9BZV3 1241 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 TTYH3Q9C0H2 523 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 VPS16Q9H269 839 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SMARCAD1Q9H4L7 1026 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 CAAP1Q9H8G2 361 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 ETNK1Q9HBU6 452 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 UBN1Q9NPG3 1134 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 THEGQ9P2T0 379 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 ZNF212Q9UDV6 495 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 KCNN3Q9UGI6 736 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SRP68Q9UHB9 627 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 USP21Q9UK80 565 aa5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 SRPRBQ9Y5M8 271 aaKnown RBP5.07□□□□□ -1.6
SPOCK3-225ENST00000535728 RTL9Q8NET4 1388 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms