RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 A6NHS1 94 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 MIF4GDA9UHW6 222 aaKnown RBP12.27□□□□□ -0.44
USP35-207ENST00000530546 ASAP2O43150 1006 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 ZC3H11AO75152 810 aaKnown RBP eCLIP12.27□□□□□ -0.44
USP35-207ENST00000530546 PIGRP01833 764 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 CYP1A2P05177 515 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 PRKCBP05771 671 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 CLTAP09496 248 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 RRM1P23921 792 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 GJA5P36382 358 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 FLT3P36888 993 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 CLCN3P51790 818 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 HADHBP55084 474 aaKnown RBP12.27□□□□□ -0.44
USP35-207ENST00000530546 PPARDQ03181 441 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 CUL2Q13617 745 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 MOGSQ13724 837 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 NCOA4Q13772 614 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 SEL1L2Q5TEA6 688 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 THNSL1Q8IYQ7 743 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 TEX9Q8N6V9 391 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 KCNH4Q9UQ05 1017 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 UTP11Q9Y3A2 253 aaKnown RBP12.27□□□□□ -0.44
USP35-207ENST00000530546 PTPRFP10586 1907 aa12.27□□□□□ -0.44
USP35-207ENST00000530546 TCRBV7S2A1N4TA0A589 114 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 CST3P01034 146 aaPredicted RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 CD58P19256 250 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 TMOD1P28289 359 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 ECHS1P30084 290 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 CTNNA1P35221 906 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 CCNG1P51959 295 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 DR1Q01658 176 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 IER5Q5VY09 327 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 C18orf8Q96DM3 657 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 FAM167AQ96KS9 214 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 NAP1L3Q99457 506 aaPredicted RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 C11orf70Q9BRQ4 267 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 MTMR12Q9C0I1 747 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 DIS3Q9Y2L1 958 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 PCDHB2Q9Y5E7 798 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 CNTNAP2Q9UHC6 1331 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 OTOFQ9HC10 1997 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 CSDE1O75534 798 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 RTN3O95197 1032 aaPredicted RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 MAPK4P31152 587 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 NSFP46459 744 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 CLDN10P78369 228 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 MAPK6Q16659 721 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 ZNF394Q53GI3 561 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 GPAT2Q6NUI2 795 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 PNMA8AQ86V59 439 aaPredicted RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 ZBTB8OSQ8IWT0 167 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 DRAXINQ8NBI3 349 aaPredicted RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 AGAP11Q8TF27 550 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 ATP8B4Q8TF62 1192 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 MAGOHBQ96A72 148 aaKnown RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 TTC7AQ9ULT0 858 aaPredicted RBP12.27□□□□□ -0.45
USP35-207ENST00000530546 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
USP35-207ENST00000530546 ZBTB42B2RXF5 422 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
USP35-207ENST00000530546 B4GALT5O43286 388 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 THAP12O43422 761 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 MSCO60682 206 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 GNA15P30679 374 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 PEX5P50542 639 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 TFAMQ00059 246 aaKnown RBP12.26□□□□□ -0.45
USP35-207ENST00000530546 ERMARDQ5T6L9 678 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 MCOLN2Q8IZK6 566 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 RBBP8NLQ8NC74 664 aaPredicted RBP12.26□□□□□ -0.45
USP35-207ENST00000530546 OR2W6PQ8NHA6 318 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 RPS6KC1Q96S38 1066 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 ADGRA2Q96PE1 1338 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 SBF1O95248 1867 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 ABLIM1O14639 778 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 TOM1L1O75674 476 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 GJB6O95452 261 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
USP35-207ENST00000530546 PTENP60484 403 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 ROR2Q01974 943 aaKnown RBP12.26□□□□□ -0.45
USP35-207ENST00000530546 ZC3H12AQ5D1E8 599 aaKnown RBP12.26□□□□□ -0.45
USP35-207ENST00000530546 CWF19L1Q69YN2 538 aaKnown RBP12.26□□□□□ -0.45
USP35-207ENST00000530546 SCARA5Q6ZMJ2 495 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 ZDHHC14Q8IZN3 488 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 SLC10A4Q96EP9 437 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 FAM129AQ9BZQ8 928 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 YIPF3Q9GZM5 350 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 WNT8AQ9H1J5 351 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 ZFATQ9P243 1243 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 SNX24Q9Y343 169 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 L3MBTL1Q9Y468 752 aa12.26□□□□□ -0.45
USP35-207ENST00000530546 DICER1Q9UPY3 1922 aaKnown RBP12.25□□□□□ -0.45
USP35-207ENST00000530546 DIAPH2O60879 1101 aa12.25□□□□□ -0.45
USP35-207ENST00000530546 UNGP13051 313 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms