RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF280DQ6N043 979 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 DHX32Q7L7V1 743 aaKnown RBP15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 EZH1Q92800 747 aaPredicted RBP15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 ADPGKQ9BRR6 497 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 POLR3CQ9BUI4 534 aaPredicted RBP15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 CRISPLD1Q9H336 500 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 ATXN3LQ9H3M9 355 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 THG1LQ9NWX6 298 aaKnown RBP15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 MBD1Q9UIS9 605 aaPredicted RBP15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 MYO16Q9Y6X6 1858 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 SMIM28A0A1B0GU29 152 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 M0R2N6 131 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 EDN1P05305 212 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 GALK1P51570 392 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 NLRP5P59047 1200 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 AKAP17AQ02040 695 aaKnown RBP15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 PLD1Q13393 1074 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 PRPF4BQ13523 1007 aaKnown RBP15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 NAIF1Q69YI7 327 aaPredicted RBP15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 ADAMTS14Q8WXS8 1223 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 HAS1Q92839 578 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 ACDQ96AP0 544 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 CRELD1Q96HD1 420 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 TMEM74BQ9NUR3 256 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 PCDHA4Q9UN74 947 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 NID2Q14112 1375 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 MYO18BQ8IUG5 2567 aa15.23■□□□□ 0.03
NKX3-1-202ENST00000523261 SHROOM3Q8TF72 1996 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 UNC79Q9P2D8 2635 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 PTPRDP23468 1912 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 PODXLO00592 558 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 SLITRK3O94933 977 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 U2AF2P26368 475 aaKnown RBP eCLIP15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 GABRR2P28476 465 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 EPHB3P54753 998 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 AAMPQ13685 434 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 NTRK3Q16288 839 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 LARP1BQ659C4 914 aaKnown RBP15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 TRIM68Q6AZZ1 485 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 NCAPH2Q6IBW4 605 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 SLC23A3Q6PIS1 610 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 RASSF3Q86WH2 238 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 SYT12Q8IV01 421 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 TSTD1Q8NFU3 115 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 SUSD3Q96L08 255 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 UBL7Q96S82 380 aaPredicted RBP15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 P2RY13Q9BPV8 354 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 SMG9Q9H0W8 520 aaKnown RBP15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 EBF3Q9H4W6 596 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 TASP1Q9H6P5 420 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 GPRC5CQ9NQ84 441 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 ANKEF1Q9NU02 776 aa15.22■□□□□ 0.03
NKX3-1-202ENST00000523261 ADAMTS9Q9P2N4 1935 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 TK2O00142 265 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 TNFRSF10BO14763 440 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 LYPLA2O95372 231 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 RARRES1P49788 294 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 AMPD2Q01433 879 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 HNRNPDQ14103 355 aaKnown RBP15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 INF2Q27J81 1249 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 DCAF4L1Q3SXM0 396 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 ARHGAP15Q53QZ3 475 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 HDDC3Q8N4P3 179 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 SLC26A6Q9BXS9 759 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 TBX20Q9UMR3 447 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
NKX3-1-202ENST00000523261 ACKR2O00590 384 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 FGF19O95750 216 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 CD59P13987 128 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 ARSAP15289 507 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 PTGER3P43115 390 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 CYP4F8P98187 520 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 DUSP4Q13115 394 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 MAPK6Q16659 721 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 ADCK5Q3MIX3 580 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 XKR4Q5GH76 650 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 PPP4R3AQ6IN85 833 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 ANO7Q6IWH7 933 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 DNAJB7Q7Z6W7 309 aaPredicted RBP15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 BLIDQ8IZY5 108 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 APPL2Q8NEU8 664 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 SLC39A7Q92504 469 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 DDX12PQ92771 950 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 PSMG2Q969U7 264 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 PGLYRP2Q96PD5 576 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 CCDC113Q9H0I3 377 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 FSCN3Q9NQT6 498 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 DKK4Q9UBT3 224 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 ASB3Q9Y575 518 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 RAI2Q9Y5P3 530 aa15.2■□□□□ 0.02
NKX3-1-202ENST00000523261 PCDH15Q96QU1 1955 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 USO1O60763 962 aaKnown RBP15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 OPHN1O60890 802 aa15.19■□□□□ 0.02
NKX3-1-202ENST00000523261 OR4Q2P0C623 313 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms