RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 STAP2Q9UGK3 403 aa5.8□□□□□ -1.48
HMGB1P1-201ENST00000522557 MED16Q9Y2X0 877 aa5.8□□□□□ -1.48
HMGB1P1-201ENST00000522557 SCAF4O95104 1147 aaKnown RBP5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 MAKP20794 623 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 SLC6A4P31645 630 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 ALDH1A3P47895 512 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 FMO1Q01740 532 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 FLYWCH1Q4VC44 716 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 FAM47AQ5JRC9 791 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 METTL24Q5JXM2 366 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 ZNF276Q8N554 614 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 NKAPQ8N5F7 415 aaKnown RBP5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 CCHCR1Q8TD31 782 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 SLC25A43Q8WUT9 341 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 MTFMTQ96DP5 389 aaKnown RBP5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 TNIP3Q96KP6 325 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 NDC1Q9BTX1 674 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 ZNF768Q9H5H4 540 aaKnown RBP5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 ARMT1Q9H993 441 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 FEZ2Q9UHY8 353 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 TPCN1Q9ULQ1 816 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 ACTL7AQ9Y615 435 aa5.79□□□□□ -1.48
HMGB1P1-201ENST00000522557 A0A1W2PPC4 97 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 TBKBP1A7MCY6 615 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 AHRRA9YTQ3 701 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 PRR5-ARHGAP8B1AHC4 643 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 LEFTY2O00292 366 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 KPNA5O15131 536 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 NCK2O43639 380 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 ADH4P08319 380 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 TNFSF4P23510 183 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 APOBEC3AP31941 199 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 TRAPPC10P48553 1259 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 CNGA2Q16280 664 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 SYT12Q8IV01 421 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 IL17RDQ8NFM7 739 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 FBXO18Q8NFZ0 1043 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 NMD3Q96D46 503 aaKnown RBP5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 STARD7Q9NQZ5 370 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 COL20A1Q9P218 1284 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 EIF2B4Q9UI10 523 aaKnown RBP5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 ZDHHC8Q9ULC8 765 aa5.78□□□□□ -1.48
HMGB1P1-201ENST00000522557 H3BUI4 141 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 FGAP02671 866 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 CD1AP06126 327 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 SBK3P0C264 359 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 IL2RBP14784 551 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 ZFP36P26651 326 aaKnown RBP5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 PTPN7P35236 360 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 FAM189BP81408 668 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 BTKQ06187 659 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 TCF15Q12870 199 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 DAG1Q14118 895 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 KIF22Q14807 665 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 IZUMO3Q5VZ72 239 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 AFMIDQ63HM1 303 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 MRGPREQ86SM8 312 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 MICU3Q86XE3 530 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 RNF169Q8NCN4 708 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 SLC35B2Q8TB61 432 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 BRI3BPQ8WY22 251 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 HAS1Q92839 578 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 KIAA1191Q96A73 305 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 GDF15Q99988 308 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 SELENOOQ9BVL4 669 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 C1orf43Q9BWL3 253 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 TMEM140Q9NV12 185 aa5.77□□□□□ -1.49
HMGB1P1-201ENST00000522557 A0A1W2PPL8 197 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 TRIM43BA6NCK2 446 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 RHPN2P1A8MT19 583 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 CXorf49A8MYA2 514 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 PJA2O43164 708 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 TEX33O43247 280 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 PIP5K1CO60331 668 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 FGF18O76093 207 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 RECQL4O94761 1208 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 ABHD16AO95870 558 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 FOSP01100 380 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 TGFB2P61812 414 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 STK3Q13188 491 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 BMT2Q1RMZ1 405 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 Q6ZPA2 131 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 PDZD4Q76G19 769 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 RSPH3Q86UC2 560 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 AMER2Q8N7J2 671 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 BRIX1Q8TDN6 353 aaKnown RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 POF1BQ8WVV4 589 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 STON2Q8WXE9 905 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 TRIM43Q96BQ3 446 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 TEX101Q9BY14 249 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 SENP6Q9GZR1 1112 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 C11orf54Q9H0W9 315 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 RLIMQ9NVW2 624 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 POGKQ9P215 609 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 CORO2BQ9UQ03 480 aa5.76□□□□□ -1.49
HMGB1P1-201ENST00000522557 PNPLA7Q6ZV29 1317 aa5.75□□□□□ -1.49
HMGB1P1-201ENST00000522557 B5MCH6 92 aa5.75□□□□□ -1.49
HMGB1P1-201ENST00000522557 TRIM24O15164 1050 aa5.75□□□□□ -1.49
HMGB1P1-201ENST00000522557 SLC43A1O75387 559 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms