RNA–Protein interactions for RNA: ENST00000514404.1

AC008560.1-202, humanhuman

APPRIS ALT2 TSL 4

Gene AC008560.1, Length 332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008560.1-202ENST00000514404 TCF7L1Q9HCS4 588 aa2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 HOMER2Q9NSB8 354 aa2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 CALCOCO1Q9P1Z2 691 aa2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 LRIT1Q9P2V4 623 aa2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 ARPP21Q9UBL0 812 aaPredicted RBP2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 SAP30BPQ9UHR5 308 aaKnown RBP2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 AGAP1Q9UPQ3 857 aa2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 NOP58Q9Y2X3 529 aaKnown RBP2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 MRFAP1Q9Y605 127 aa2.32□□□□□ -2.04
AC008560.1-202ENST00000514404 WDR27A2RRH5 827 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 LINC00473A8K010 186 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 NT5C1B-RDH14C9J2C7 533 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 F2RL2O00254 374 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 XPOTO43592 962 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 PEX1O43933 1283 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 PDHA1P08559 390 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 KCNA2P16389 499 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 TOB1P50616 345 aaPredicted RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 ELLP55199 621 aaPredicted RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 CDC42EP1Q00587 391 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 EXOSC10Q01780 885 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 NHLH1Q02575 133 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 FPGSQ05932 587 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 SNAPC2Q13487 334 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 DYRK1AQ13627 763 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 BOP1Q14137 746 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 RAB39AQ14964 217 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 ERCC6LQ2NKX8 1250 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 KHDC1Q4VXA5 237 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 PABPC1LQ4VXU2 614 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 TMEM240Q5SV17 173 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 EFCAB2Q5VUJ9 269 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 ZNF788Q6ZQV5 615 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 AMIGO2Q86SJ2 522 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 RSPH3Q86UC2 560 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 SRRM1Q8IYB3 904 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 COLGALT2Q8IYK4 626 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 TOR1AIP2Q8NFQ8 470 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 NSUN6Q8TEA1 469 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 STAG1Q8WVM7 1258 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 SLC9A6Q92581 669 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 MED15Q96RN5 788 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 C1orf43Q9BWL3 253 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 CPNE5Q9HCH3 593 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 TYW1Q9NV66 732 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 JKAMPQ9P055 326 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 DKK3Q9UBP4 350 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 CFAP20Q9Y6A4 193 aaKnown RBP2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 AOX1Q06278 1338 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 SHROOM4Q9ULL8 1493 aa2.31□□□□□ -2.04
AC008560.1-202ENST00000514404 DNAJC9-AS1A6NH13 148 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 MANSC4A6NHS7 340 aaPredicted RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 INO80B-WBP1J3KQ70 363 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 PROM1O43490 865 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 C1RP00736 705 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 POU2F2P09086 479 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 SRGNP10124 158 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 CHRM3P20309 590 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 MALP21145 153 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 IBSPP21815 317 aaPredicted RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 CCND1P24385 295 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 GRIA3P42263 894 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 RECQLP46063 649 aaPredicted RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 KRTAP10-11P60412 298 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 RPS7P62081 194 aaKnown RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 PSMC1P62191 440 aaKnown RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 SP2Q02086 613 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 TFF2Q03403 129 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 TXNRD1Q16881 649 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 AKNAD1Q5T1N1 836 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 TSTD2Q5T7W7 516 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 PAPD7Q5XG87 772 aaKnown RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 KAZNQ674X7 775 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 PPP4R3AQ6IN85 833 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 TAPT1Q6NXT6 567 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 ZNF365Q70YC5 407 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 MIGA2Q7L4E1 593 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 CLNKQ7Z7G1 428 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 TTC7BQ86TV6 843 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 PNMA8AQ86V59 439 aaPredicted RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 CPA6Q8N4T0 437 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 NLGN4YQ8NFZ3 816 aaPredicted RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 ANKS1AQ92625 1134 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 CHMP4CQ96CF2 233 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 FBXL20Q96IG2 436 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 INO80BQ9C086 356 aaPredicted RBP2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 INTS13Q9NVM9 706 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 SLC17A6Q9P2U8 582 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 RNF7Q9UBF6 113 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 ADGRA2Q96PE1 1338 aa2.3□□□□□ -2.04
AC008560.1-202ENST00000514404 CCDC195A0A1B0GUA6 201 aa2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 TOR1BO14657 336 aa2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 MPPED1O15442 326 aa2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 VPS4BO75351 444 aa2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 NHLRC4P0CG21 123 aaPredicted RBP2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 MTHFD1P11586 935 aaKnown RBP2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 CDK4P11802 303 aa2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 JUPP14923 745 aa2.29□□□□□ -2.04
AC008560.1-202ENST00000514404 PDCP20941 246 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms